NONHSAT095835

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT095835

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2329 nt

Genomic location

chr4+:25416774..25420119

Exon number

2

Exons

25416774..25418220,25419238..25420119

Genome context

Sequence
000001 AAGTTCTGAA AAATAAATCA TATTTAGAAC GCCATTGGTA GCTTAAAAAT GGTTTTAAAC CTGAATTTGA AGAAAATGTT 000080
000081 GAGACCACGA TGTAACCAAA AAGAAATAAT TGGGTTATTT CTATTCCAAA TGTCTTTGGT GACTGTGTGA TTTTAAACCA 000160
000161 AATTGGTTTA TCTATCTAGG CATTTAAACA AGTTCTCAGT GTTCTAAAGA AGTACATGTA CTGACCCTGA CAATCATGTT 000240
000241 CTTTTAAGCC TTTAGATTAT TGACTATCCA GGTTGTTCCA CAGAGTCTCT TTTTTTCCCC CTTCTTTCTT GAAGATCTGT 000320
000321 GAGTAATGGA CTAATTGCTA TTAAATTTGG GAGCTTTACA TATGCCACAA CAGAAAAAGT CAGAAGAAGG TAAGTCTTGA 000400
000401 ATCTTGTTTG GATGAAATGT AGATACATGT GATATGTGTA TATGTTTAGG AATAGGATCA GACTCAGTTA CGGTGGTAAT 000480
000481 ATAGGTAAAA GGGCTTTGCC ACTTCCCACA TCAAGGGCAG GATTCTTTGT GTATTTATAC ATAGAGAATG ATTTGACTTG 000560
000561 TGATTGAATA GAACCTTACT GCCCTGCAGT TTATGTCGTA CGGTTTCCTA TAATTAATAC TCCTGAGCTC CCTGTTGACA 000640
000641 AAGAAAGTAA TGTGGTTCCC ATGGGCAGAT GGCCTGCAGG GCTGAAGTTC TTGTTACGAC CAAAAAAAAT TATGAGGTGA 000720
000721 TGCCATTCTT AGTGATGGGA GATTTTCTTA GGATTCAAAA TGGTAACAGT ACCTAAGCCA TCCCTGAGGC TTCGCAAGGG 000800
000801 AAAGAAGTGA CTAATCATAG GCTGATCTTT TTCTCACTTT TTTCCTCACA TAAAATAAGT TTTTTTATGA TAAAGTCCTT 000880
000881 GGAGTTGCTG TGCCTATTTT TCATGTGTAG TATCTTATTT TTATTTCTCA GTCTAGTCAA CTCTGCTGAA TGTGTATATA 000960
000961 AGGTGTCATT CATAGAATTT CCACAGGCTT AAGGCCTAAC CATTGATGGC CAGGGGCTTT CTAGAACTGA AACAACTTCA 001040
001041 CAGATTTTTG GGGGTCATGA TTACCCATTT TTAAGATTTG GTTATATATG TGAATAATCA GTACAAAAAG TAACTGATTT 001120
001121 TAATACAAAC CAATGATATA TTTTAAATGT TATTGTACAG AATGTCACTT AACTTTTAAA TTTTTTTCTG CTTGCTGCCA 001200
001201 GTATAACATG CATACAATAT TTTCTCAGTA GTCACGATCA TCTTTGATAT AACAAAACTT ATTTTAATTC TAGCATCTAC 001280
001281 AGTTGTTTAG ATGCACAGTT TTATGATGAT GAAACTGTAA CAGTAGTTCT TAAAGACACT GTAGGACGTG AAGGAAGAGA 001360
001361 TAGACTCTTG GTCCAGCTGC CTTTGTCTTT AGTATATAAC AGTGAAGATT CTGCAGAATA TCAGTTCACT GGGACTTATT 001440
001441 CTACAAGGCT AGATGAACAG TGTAGTGCTA TTCCCACCCG TACCATGCAT TTTGAGAAGC ACTGGAGATT ACTGGAAAGT 001520
001521 ATGAAAGCAC AGTATGTTGC TGGGAATGGT TTTCGAAAAG TGTCCTGTGT GGTAAGTGTT TAGAGATCGT TCAGCAACTA 001600
001601 AGAAATTACA AGAAGTAACG TTGCTTCTTT GGAACCTTCA TCAAATACAT GATATATAAG GTCCTTTTGT GCAAATATTT 001680
001681 TTACTGTGAT TTATAGCTTG TATTGATTAT GATCATGTGG TGGCCTTAGC TATTTAGTTC TTGTTCTGAT AAAGCTTACT 001760
001761 AAGTAGTTAA TAATAATACT AGATTTTAAT CTCACGAAAT TGCCACTGTT GTTATGTGGA GATCTTTTTA TACAAAATGA 001840
001841 AGGCTGAATT TATTGATTTT GTTGTAAATT GATGGGAATA TAACTTTCCT ATAAAACCAT TCTTTGATTC AGACTTCTGA 001920
001921 TTTCTAATTC TTTATATATG ATAAGCCATT AATTTAAAAA TGCTTTTATG GCCTTTTCTT TTTTAGTTAA GCTCAAATCT 002000
002001 TCGTCATGTG AGAGTATTTG AAATGGACAT AGATGATGAA TGGGAGCTCG ATGAGTCTTC AGATGAAGAG GAGGAGGCCA 002080
002081 GTAATAAGCC TGTAAAAATA AAGGAAGAAG TGTTGTCGGA GTCAGAGGCA GAGAACCAAC AAGCTGGTGC TGCCGCTTTA 002160
002161 GCTCCAGAGA TAGTCATTAA AGTGGAAAAA CTTGACCCTG AGCTAGACTC CTAATCTAGC TTGCCATTAT TGTGTGTGTA 002240
002241 ATTATGGCCA AAAGGACATA GGAGATGGAC TAAGATGTCT TGGACCACCT TTGTGTAACA AAGAAATAAA CAGTAAATTT 002320
002321 TATTTTTTC
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Predicted Small Protein

Name NONHSAT095835_smProtein_866:991
Length 42
Molecular weight 4738.7545
Aromaticity 0.170731707317
Instability index 42.1609756098
Isoelectric point 4.78338623047
Runs 5
Runs residual 0.054017656741
Runs probability 0.0156862745098
Amino acid sequence MIKSLELLCLFFMCSILFLFLSLVNSAECVYKVSFIEFPQA
Secondary structure LLHHHHHHHHHHHHHHHHHHHHHHLLLLEEEEEEEEEELLL
PRMN LLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLL
PiMo iiiiiiiiiTTTTTTTTTTTTTTTTTToooooooooooooo