ENST00000426869.3
Revision as of 08:25, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...")
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
ENST00000426869.3 |
Source |
Gencode19 |
Same with |
lnc-FAM27L-1:1 |
Classification |
intergenic |
Length |
682 nt |
Genomic location |
chr17+:21825297..21826499 |
Exon number |
2 |
Exons |
21825297..21825574,21826096..21826499 |
Genome context |
|
Sequence |
000001 AATGCGCATG CGCAAGGAGA GAGCCGCTTC TCCCCATCAC AGCGATTCCC AGGGTTGTCG TAGAAACCAC TCCCTGAGGC 000080
000081 TTCGCAAAGC AGGAGCCCTC CGTAGCAGGG CTTCGGTGTC GGGGCTCCGA GGCTCCGGCC TGACTTCTCC ACGGGGTACA 000160 000161 CAGGAACGTC TCCGGACGCC AGGACCTGAA ATGGGCCGAC TAGGATGACG AAACCACAGG CAGAGTCCGG GGAAGCAGCG 000240 000241 CGGCATCCCA TCTTCAGGCC TGCCCGGAGG GTGTTCGGGA TCAAGATGAC CACACTCCAG CCAAGGATAA AAGCCCCACA 000320 000321 GGAGCTCACT GTCCTGCAGG AGAGGAGCAG GCCCACGTCC AAGAAGATGG CTGTATGTTT TCACGGCTCT TCTCTGAGAA 000400 000401 GTGAAGCCAC ACCACGATAC AGTCTTGAAG AGGAAGCCAG GAATGGGAGA TGGCAACAAG CCCTGTCATG GTGGCCTCTC 000480 000481 TGAACAAGTT ACCCTTTTGG CACCCCTCCC CTTATGCCCG TGGCGGTGGC ACAGTGCTGT ATCCTGCCTG GGCTCTGGCC 000560 000561 CCTGCTCTGT CCTCCCTCTT ACTCTGTCTC CCTTGTTTCT GAGGGGCCTA GATGCTTCTA GGTCTGGCTG AATGTCTTCA 000640 000641 AAAAAGATCA CTTCCCAGTC CATCAGGGAG ACAGTTGGTG GA |
Predicted Small Protein
Name | ENST00000426869.3_smProtein_449:601 |
Length | 51 |
Molecular weight | 5317.3181 |
Aromaticity | 0.12 |
Instability index | 79.792 |
Isoelectric point | 8.84185791016 |
Runs | 6 |
Runs residual | 0.0446783625731 |
Runs probability | 0.0389507154212 |
Amino acid sequence | MATSPVMVASLNKLPFWHPSPYARGGGTVLYPAWALAPALSSLLLCLPCF |
Secondary structure | LLLLHHHHHHHLLLLLLLLLLLLLLLLEEHHHHHHHHHHHHHHHHHLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooo |