ENST00000592553.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000592553.1

Source

Gencode19

Same with

NONHSAT068523

Classification

intergenic

Length

925 nt

Genomic location

chr2-:306225..313163

Exon number

4

Exons

306225..306240,308937..309349,310215..310499,312953..313163

Genome context

Sequence
000001 AACAAGAAAA TAGACTCTAC TTAGAAATGA AACTCAACTA AAGGTAAAAG TTGTCAGGAA CATCTCCAAG AAAGCCAGAG 000080
000081 TCAGCCTCTA AACTTTGCAT CAAGAACGCA ATGGCTTCCC TGAGGGCCCA GGGACGCGTG GCAGCTGTGA GGCAGCCCCT 000160
000161 TCTCTGCTGT CGAGGAACTG GACACTTCTC CTGTCCCTTC CCACAAGGTG GGTATAATAT TAGGCAGAAA CCCAATATAA 000240
000241 AAAGAAAAGC AGAGTTGTTG TAGATTCATC GAGGGTTGGC GACCTGGTTC CAATGAGCCA TCTCCCTGTT CCGACAGGGG 000320
000321 CTTCCTGGAG CTCCTGCAAC CCCAGGCATT AGTTCCGGTG CAGTTCTAGG ATCAGATCAA TTCACTCGAC AACAAGAGAA 000400
000401 ACAAATGGAG ATTCCTACAC AAAGACTTTC AAGCACAAAG AAATCCTGCT GCCTGTAAAG CGGAGCTGCC TCAGCCCTTG 000480
000481 ATGAACGACA GAAAATCTCA CATTCCAGGA ATTCAGATGA AGTGAAGTGC TCTCATGGGG ACCAGGCATG GTTATGCCAG 000560
000561 TCCACTGCCC TGCAAGCCTC AAGGGAAGCC AACTGCCCTT CAGCAAGTCA CACCTGCCTT GGTGGAGGCC TTGATTGGAA 000640
000641 GTGCCACACG CTACATGTCC AGTCCTGAGC GGGAGAATCG GTGTAGGGAC GTTCTGGGGA TGCCAGCTGT GGCCAGATCA 000720
000721 GGTCCAACTA CAGAAGAATA ATGAAGACTC CACCTGAGGG CTGGAAAAAC AAAACCTCAA GTGTGAGGCA GCCAACCTGT 000800
000801 TACCTCGAGG GACTGTTCCG CAGCACAGCG GGGCCATGGG AACAGCAGCA GACACCCCGA CCTCCTCGCT ACCTGTGTGT 000880
000881 GTATTAACAC GCCGGCCTCC TCGCTACCTA TCAACTATGG CCTGA
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Predicted Small Protein

Name ENST00000592553.1_smProtein_110:262
Length 51
Molecular weight 5539.4977
Aromaticity 0.06
Instability index 64.096
Isoelectric point 10.9221801758
Runs 9
Runs residual 0.0153216374269
Runs probability 0.0254175744372
Amino acid sequence MASLRAQGRVAAVRQPLLCCRGTGHFSCPFPQGGYNIRQKPNIKRKAELL
Secondary structure LLLHHHLLEELLLLLLLEELLLLLLLLLLLLLLLLLLLLLLLHHHHHHLL
PRMN -
PiMo -