Lnc-SLAIN1-4:1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-SLAIN1-4:1

Source

LNCipedia2.1

Same with

NONHSAT034452

Classification

overlapping(AS),antisense

Length

4001 nt

Genomic location

chr13+:79152611..79193239

Exon number

4

Exons

79152611..79152798,79179436..79179579,79181107..79181345,79189810..79193239

Genome context

Sequence
000001 GTAAGAAGAA AGCCCAAAGA CAAAACCAGA GGCAACTGGC TGCTGCATCG CCCACCTAGT GGCAGTAGTG TGAGCTATGG 000080
000081 ACAAAAGATC TAAGTCTCCA GGACAAAGAG TTGTGCAGCT GCTCATTTTC CTGTTGACTT CTGTCTAAGA CTTGGAGATG 000160
000161 TTTGTAAGAT TGGGACCTAC CTACAGAGCT CCAGAGGGAA GTGAGAAGGA TGTTCACTTG CTGGTGAGAG AAGGAGCTGG 000240
000241 TTCCATCCAT TACGCAGTCC CCTGGGAGCG CTAAATGCAA CTTTATCTCA ACGGGGAGTG GACGATGAGC AGGACGTCGC 000320
000321 TAGAGGGAAA GAGCCTCACT TCCCGTTTCC TTTGGCAGCG CCCTTTTCCC GACCTAAGGG AGCAGACCTT CGTTGGTTGG 000400
000401 CGTGAGGACT GGCGGGAGAG GTTTTGTGCC AGGATCCGCA CTGTCTGGGG TGAACGCTCC TCACCTTTGA CCTGAACCGC 000480
000481 CAACTTCCCA TCCTCCACTT TTGGAGAGCG CGCCTGATAG CTGCTGCCCA CCTGGGCACT GACATCCTCC TTCCGACCGG 000560
000561 GTGCGGAGAA AGCACAAAGG AAGTAGACCA AGGAGACTGA AGGTGGTTAT GAAGACTGTG CATCTCTGAG GACATCTTAA 000640
000641 ACAAAGATGA CCCAAATCTT TGATCTTCAA ATAGTCGATG TGAACTGCTT AACAAAATGC CCTGGGAAAA CTCTGTCTGA 000720
000721 AACAAGCAGC TTGGGGGTTT GATTTCATTA GTTACTGGAC AAGAACTGGA ATGGAGTGAA AAATCTTCAT TCATTTCTTG 000800
000801 GTCAGATGGA GAGAGGAGAA AAAAAGAAGT GGGTTTCCAT TCACTTCCAT TTTCTAACTG ATCATTAGTT AGAGAACCTT 000880
000881 TGGAAAGGTT TAGCTCAGTT TTTTCTTCCA ACTTATCAGG TTCCTCAAGA AATTCACTGC CTTGAGATGA CTTTGATAAC 000960
000961 CCATCCAAAT CCAGTGACTT AAAACCGTTA TTACAAGGGC TCTTGCTGTT GTCTGACTCT GACATCATTG AATCCAACTC 001040
001041 AGAGATTTTG TCAAGGTAAG CAGCATCCAT CGATGCTTCA CTGGATGTTC TTGTCCGGTT CATTTCAAAA GAGCGAATAG 001120
001121 AATTCAACCT TTTGGATAAA CATAAGCCTG ATTTCTCACT CAATTTTGAA GATATTTCTC CAACAGAATT TGCTATCGTG 001200
001201 TTCCCCTCTG AACTTTCAAA ATCTAAGTTT TGGGCATAGC TTGTGGAACA ACAGTCCCAA AATCCTGTCT TTGGGGAAGA 001280
001281 AAAACATTCT GATTTCTTTT CATTTTCACT TCTACTTATA TCATCTTCTG AAGAATCTTT ATTAGAAACA TTTGAAGAAT 001360
001361 CACAAAAATC ATCAAACACC AATTTTCTGA GATGGTTTGA GTGCTTTTTG GAACCTCCTG CTTGGACCAC AGAGCTCTCT 001440
001441 CTATTTTCTG GAGTACTGAG CTGAAGGCAA CTAAGGGACA AAGGAGTACA AGGAGCTGGA AGATCATAAA GTTCTTCATC 001520
001521 TTTGTAGGGT ACACAGTCAC TTGGTTTATT CCCCCATTCT CTTTCCAAAT AAGTATCCAT ACTTGTATCT GTCACATCTA 001600
001601 ACATTACTTC TACCTGTTCT TGATATAGGT CTTTGTTCTT AGAACAGTTA AGGTCTGCTT TGCTGGTACT TTCCTGCCTT 001680
001681 GCAGAACTGG TGTCACACAG TCTGCTGCTG GAAGGCTTCG CTAGGTGAGA AGAACTGGAG GTGGATGAGC CAGGCTGCTT 001760
001761 TCTGGCACTA TCGCCTTGAT TCTTTGACAC CACATCCTCC TCACTGCCTT TGCTCCCTTT GCCATCTGCA GAAAGTGCTG 001840
001841 TCTGGCAAAT GGAATTCATA GCTTCTTTCT CTTCACTTGA ATTTTTTAGC TGTGCAACTT GAGATTCTAG TTCCTCTATA 001920
001921 TACTTATCAC TTCGTTCCAG GGCTTTCTTG AGGCGATTGG TTTCACGCTC ATACTGTTCT ACTTTGGACT GAAGAGCAGC 002000
002001 AACTGCAAAC CTTCCAAACC TACAAAGAAT GGAAAGATAG TTAATCTTAT AACTCAAGCT TTTTTCTTTT CAAGGTTTGA 002080
002081 GAGTGCAAAC TGTCCCAGGC TATTCTAATT TCACCTAACA GTGACATTTC AGACCACTCA ATGAGTAGGG CAAATGCCAG 002160
002161 ATGTATATTT TCAAAAAATG GTTTCCCCAC TTACATAATA ATAAACATAT GATAATAATA GCAAAACCTA ATAGGATATT 002240
002241 TTTGTGGTTA AATCAGATCT ATGGTAGCAG AGAGGCAGAA ATGTGCTGAT GATTTCCCCT CGAAGAGCTG GCTGTATCAA 002320
002321 TTCAGCTCAT ATATGCATGA AGAGTTATCC CCTAAAACAA TGGCAAAGAT TTATGATAAC ATTTGAACAG TGGTCTACAT 002400
002401 CTTGAAATAT TTACATTCAA TCATTTTCCT ATCATACAGC AGTGTTTTAC AATACATTTC TTATATAATG TCACCTTGTC 002480
002481 AAACATAAAA TGCCAATTTG AAATTCAGAA ATCTTAGCAG TCCCAGGAGG GGTGGTTTTA AATACTTATT TGGGCCCTTT 002560
002561 CAATTATAGC CACCCTTGAT CTGAAGCTTT TCTGTGGCTT TTCAGAGCAC TGGCCTTTAA TTTATGTCAG CACTACTTAT 002640
002641 TTTTGGCATT TTACAGCTGT GTGGGACATC TATCTCATTT CTTTCAACTT TGAAATATGA AGTCAGTGCT TGTGATTCCA 002720
002721 ATATACTAGG CAAAAAAAAA AATTTTTTTG TACACTTTCT GAAAGAGAAC ATTTTGGAGA GTGACTGAAA AAGAATTCCC 002800
002801 TTATTCACAA AAAGTCTACT CCTTTTACAC CGGGATTATC TTGCTGTTAT TTCCACCAAG AATGAGTACT GTGTTAAGCT 002880
002881 CAGGAAACAA TTTTTGAGTA CCTAGTATAG GTTAGGTGGT ATATTTGGGG CTGGGAACAC AAAAGATAAA AAAGACTGTC 002960
002961 TAGCTCCAAG GGACATAAAA TATCTACCTT AAATTCAATC TTATCACCAA AAATAAATTC TATCTTTCAG GAAACTTATG 003040
003041 AGCCAATAAA TAACATAATC CCGTGAAAAA TACCTTATCT CCTCCAAAAT TCTTTTCAAA GCCTATTCTT AATCATCTTT 003120
003121 TTGATGATTT ATATATTGGC CCATTTCTAA GAATTAAGGG ATTGTCTGTT TGGAGGAAGC TATGAGAAGG TGACTTTCAA 003200
003201 AAATTATTTT TATCTTTGGG TTTATCTTTT TCTTCCTTTT TTCCCCTAAT TTGAAAAATA ATTACAATTA AGAACATGTA 003280
003281 TTTAGTATTG AAAAAAAAAA CTACAAAAAA AGCAGAAGCC AATAGCAATT GCCCCTCTTA GAATCAACCA CAACATGTTT 003360
003361 TCAACTCCCA CTTAATGCCC ATCACCTCCT AAACCACTAG CCCAATTCAT TCCCCATCTC AACCCCTACA TAATCCCTGC 003440
003441 ACTCTTATCA CTGAAGGAAA AAGCAGAGGC AAAGGTAAAT ATAGAATCAT AAAATCTCAA GATTAGAAAG GGCTTTAAAA 003520
003521 GACATGATTG CTGAATATTG ATTTACTCAC TGCAATTAAC TGAACCCCCA GAGAGAGCAC GCTCCCTTCA ACTTCTAAAA 003600
003601 AAACACAGCA AAAACCACAG GTATAACAAA AACAAAAGCA ACTATAATAA CAAGCCTCCC CATTTTAAAG ACAAAGTTTA 003680
003681 CTACTGTATT TGGTTAAATG AATGATGGGA ATTTTTCTTC TTTGTTAAAA ATGTTTTGGC TTATAAATGT AGTACTTCAC 003760
003761 AGAGTTGTAG TTCTGCAAGA GAACTTTTAA AAAGTGGGCA AAGACCTTTC AGTACATTAA GTACAAATGT TTGTTAGTTC 003840
003841 TTGATTGTAA CTACTCTGGC ATAATCAAAT AACCCACATT TTTAAATGGA AAAACTGTAG TATGTTTATT TAATGCCAAT 003920
003921 AAGCAAAAGT GACAGCCTTA CATTTGCTTA TCAAGATAAA TTTCTTCAAG TAAAATTTTT TATAATAAAG GTATCTCCTC 004000
004001 A
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