ENST00000518837.1
Revision as of 09:12, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000518837.1 |
Source |
Gencode19 |
Same with |
lnc-PANK3-4:1,NONHSAT104978 |
Classification |
intronic(AS) |
Length |
489 nt |
Genomic location |
chr5-:167392192..167394091 |
Exon number |
2 |
Exons |
167392192..167392583,167393995..167394091 |
Genome context |
|
Sequence |
000001 GTTTCCAAGG AAGACTAAGA AAACTGCAAA ATTAAAGTGC ACTGCAACAT GAAATGCTGC TGGTGGCCAG GCGAGATCGT 000080
000081 GGTGTCAAAA AGGCAAGATG GAATCTCACG CTATCACCCA GGATGGAGCG CAGGGGTGTG ATCATAGCTT ACTGCAGCCT 000160 000161 CCACATCCTG GGCTCAAGAG ATTCTTCCAT CTCAACCTCC CAGATTACTG GGATTATAGG TATGAACCAC TGCATCTGGC 000240 000241 CTGGAGAGAC ATTTTTTAAA GAGAAAAATC AATTGCTGAG GGCTTTGGAT ATACTACATA TGCTATTATC TGTAAATGGA 000320 000321 TGATTTTCTG TGTTATACAT ATTATTTTAG AATCAAAATA AGTCTGGCCA ATAACTGCAC TCAATTCTCT TGCCTCATAA 000400 000401 ATGTAACATG TCCAAAACTG AACTTTTGTT TTCTGCCACA AAAACCTGTT CCTTCTTCAG CACATGACAT TGCTATTCAC 000480 000481 CCAGACATC |
Predicted Small Protein
Name | ENST00000518837.1_smProtein_53:322 |
Length | 90 |
Molecular weight | 10105.8458 |
Aromaticity | 0.0561797752809 |
Instability index | 46.0853932584 |
Isoelectric point | 10.4955444336 |
Runs | 15 |
Runs residual | 0.0253359770875 |
Runs probability | 0.0326620738386 |
Amino acid sequence | MLLVARRDRGVKKARWNLTLSPRMERRGVIIAYCSLHILGSRDSSISTSQITGIIGMNHC IWPGETFFKEKNQLLRALDILHMLLSVNG |
Secondary structure | LEEEEEELLLLHHHHEELLLLLLEELLLEEEEEEEEEEELLLLLLLLHHHHEEEELLLLL LLLLLLHHHHHHHHHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |