ENST00000492250.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000492250.1

Source

Gencode19

Same with

lnc-TRPV2-1:17,NONHSAT145954

Classification

intergenic

Length

565 nt

Genomic location

chr17+:16342352..16344816

Exon number

4

Exons

16342352..16342374,16342974..16343017,16343499..16343567,16344388..16344816

Genome context

Sequence
000001 TTTTCATTCC CGTTGTTATG GAGATTGCGT ACCCACTGCA GAGTGCTGAA GACGGGGTAG CCACGAGGTT GCAAATTCGT 000080
000081 GAAGAATCAG CATCATGTTT GGCAGCTGAG TATTGGAGCC AGGAGCCTGC CATGAGGTTT TGAGAACAGA GTGCTGTTTT 000160
000161 AGAGCTGGCA GCAGCATCTC AGCCCAAGAG AAGGTAAGCC TTGAGCTGGC CAATGATCCC TTCAACCCCA TAGTGGAATG 000240
000241 AATAAACAGC TGATCTTGTT AAAACTCGCT TCAAAAAAAA AAGATATCAA ATGATGAAAT CACCCAAAAT AGCTGGAATT 000320
000321 ACCGGCAGAT TGTGTAGTGG TGAACCTATG GTTTTCTGAA GATATCTCTT ACCCTGTGAT TGACTGTCAG TTGGTGCAGA 000400
000401 AAGTGAGATT GAAATGTAGT TTCTTTGCAG GTTATATTCC CAGAGGATGT CAGTCCCAAG GACCAGTAGC TGCCATCAGT 000480
000481 TTGGATTCTG AAAACTAACT GGCATCAACA CTGGGTGTAG AAACATGCTT GCCTTATGTA TCAGAGGACA TGCTCAGCAG 000560
000561 ATCCA
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Predicted Small Protein

Name ENST00000492250.1_smProtein_17:142
Length 42
Molecular weight 4649.1555
Aromaticity 0.0975609756098
Instability index 88.5
Isoelectric point 4.30523681641
Runs 7
Runs residual 0.00523716893611
Runs probability 0.0143210437328
Amino acid sequence MEIAYPLQSAEDGVATRLQIREESASCLAAEYWSQEPAMRF
Secondary structure LEEELLLLHHHHLHHHHHHHHHHHHHHHHHHHHLLLLLLLL
PRMN -
PiMo -