NONHSAT054842
Revision as of 07:31, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT054842 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
633 nt |
Genomic location |
chr17-:54902108..54916134 |
Exon number |
3 |
Exons |
54902108..54902214,54902442..54902682,54915850..54916134 |
Genome context |
|
Sequence |
000001 cattactcta gaaagttcct tcatATGaaa atatggaatg cctcatgaat ttatatgccg ttcttgtgca gTAGTATTTA 000080
000081 TAGAAAAAAA AAAGGTTTAA CAAGGCTTGT TTTCTCTAAA AAATTACCTG GTCACAATAG CTCTCTTTTT TAGTGTGCTG 000160 000161 AAGGAGGCAG CTGAATTATA CATAAAGTTG AGATGGTCAT TTATAAGATT CACTAGAAca gggttctgca aactgcaaat 000240 000241 atgtctgcca tctgattttg tgaatgaagt tttactggaa cacagatgaa gaaaacctgc ttgatatcac acagtcagga 000320 000321 gtcaactgag ttggggcttt gaacttaggt ttatctgatg ccaaagtttg tgatgctctt CAACCATTTA GGGTACCGca 000400 000401 gagtgtggat tttgaatcac ctgcatcagc atcattttaa aatatagatt ctgtggtcct gaccaggtct ctgaagtcag 000480 000481 aatatgaagt ggagctagga atctaacttc ttaacaagtt ccctagatgc ctaagggtat ccctgaatga tacagttttg 000560 000561 tttGAAAGAC TGAAAAGCCC AAAGCTGGCC CTTTTGGGAA ATAGCAGTAA ATCATTGATA TGTGAAGGTT CCC |
Predicted Small Protein
Name | NONHSAT054842_smProtein_263:328 |
Length | 22 |
Molecular weight | 2517.7205 |
Aromaticity | 0.142857142857 |
Instability index | 54.8004761905 |
Isoelectric point | 3.91632080078 |
Runs | 5 |
Runs residual | 0.00816326530612 |
Runs probability | 0.0406111994346 |
Amino acid sequence | MKFYWNTDEENLLDITQSGVN |
Secondary structure | LEEEELLLHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |