NONHSAT034089

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT034089

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

883 nt

Genomic location

chr13-:60203616..60207719

Exon number

2

Exons

60203616..60204370,60207592..60207719

Genome context

Sequence
000001 agcgtgtctg gatgaaggca acaatagcag gagttgagct gggagagaaa aataggggct acatcacata ggtcaggaag 000080
000081 aggagcttgg atttgatccc atatgcacgg gaagccgctt gatgctggAG GTGAAGATGG GCAGAAAAAT GAACCATCAA 000160
000161 AAAAGAAGAA GGAGGATCAA TGCATGACTC ATGAATCAGT CTTGCTTTAC TGAAAAGTTT CAGAAAACTC AAGATTTTCT 000240
000241 TCATGCACTC AATTTGTGGT AATACAACCT CAAGCAAATC GTATATTTAT CTGATATGTG CATGCTGGAA ACTTTCCGTC 000320
000321 TCATACTTTC CAGAATCTCA GGACTCACCC AGCACAAGAG GGGGCTGGAA TTTGGAAAAC ATAAGATTGA TTTTAAACCT 000400
000401 AAAGACTCAG TGAAGATTTC TGTATCTGAA TCTCTCTGCC TACCTATTAA ATGTTGTTCC CAGGGAGATC AGCTCCAACT 000480
000481 GGAACCAGAG TGAAGCTTCT ATTCCCCTAT CCATGGACAA CACCTTCACC CACCTAGGCA TCTAGACATC TAGACACAGA 000560
000561 CCTATGTCCC ACCTAGAGAT CTAGGCACTG AGACATCTAG ATACCTAGAT ATgtctagac atcttcccag caaaaaatcc 000640
000641 caatccaact cgctcctggt cattcctact tggatgtctc acagacactt caaaatcaat gttgtaaacg aaattaatcc 000720
000721 tctatctcct gaccctcaat ggccctccct catcatttgt gtcttgcaga atgaccccac cattcaccag tttttccagc 000800
000801 tgaaacccag gagGCCACAA CAGGATTTGA GCGGCCTATA GAGATCCAAA TGCTACTGAC AGCAGCACTG AGGGCCCACT 000880
000881 CAA
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Predicted Small Protein

Name NONHSAT034089_smProtein_242:412
Length 57
Molecular weight 6356.2031
Aromaticity 0.107142857143
Instability index 76.1196428571
Isoelectric point 8.57037353516
Runs 9
Runs residual 0.00741608118657
Runs probability 0.0429841606312
Amino acid sequence MHSICGNTTSSKSYIYLICACWKLSVSYFPESQDSPSTRGGWNLENIRLILNLKTQ
Secondary structure LLLLLLLLLLLHHHEEEEHHHHLLLEEEELLLLLLLLLLLLLLHHHHHHHHHLLLL
PRMN -
PiMo -