NONHSAT078950

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT078950

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1024 nt

Genomic location

chr20+:21550665..21596820

Exon number

4

Exons

21550665..21550886,21593186..21593321,21596021..21596165,21596300..21596820

Genome context

Sequence
000001 TAGATTTAGC TGGTGGTGCA GAGATCCGTG AGCTTGCTTT TACAGGACTT TAATGATATA TAAAAGCAGC ACGAGGTGCT 000080
000081 CCTGACTGTG GATTAATTTG GAGATGACTT TCTCTGTTGA AGAGTAGCAA GACTCTCGCG AGTTCTTAAA AATGCACTTG 000160
000161 TTTGGTATGA GAATGAAAAG CAGTGGCTGA AGAACCAATC TTCAATGGGC AAGCCTTCTC TGTGTCTGTT CTAACACGTG 000240
000241 CCATTTGGGA TCCCTTGGAA TCTTCATGTA CAGAACTGGT TGCTGCCTCG TTGAGTCGGT GGGGACAGAA TAGCTCCTGG 000320
000321 TTGACAGCAT GGGTTGTGCA GAAGGACGGA TCCTGCAGAC ATCAATATCT GGCTTTGAGT GGCACAAAGA AATAAAGGAA 000400
000401 TGTGGATTCA GACCTCACTG GGATGCTTGG CAATTCTAAT TCTACCCCAG ACTGCAAATG GACACACAAC TGTTGTGACT 000480
000481 TTTGTTGAAG AGGAGAAGGA TGGCACAGAA GCTGGATTCA GAAGCACACA GGTCTGGGGA TGCAGGCTTC GGCCAGCCTG 000560
000561 ATGCAAGGAA AGACTGCCAT CTCGTGGTCA GCTCAATCCT GGCACCTTGG TGAGGGACCA GGCTGCAGAA AACCAGGCTT 000640
000641 GGGGAGGAAA CGGTGCTGCA AACTGGATTT CTGCCGGACA GTGTGGATGC CCTTAGAAAA CACCCAGAAA AGAGCTGAGT 000720
000721 GCCCCCCAAG GTAGGCTTCA GTGAATCCTC TGCAGGTGTG TTGTCATCCC TTGAGCCAAA CACATGCTTC ACACACACGC 000800
000801 TGCAGGCTGC GTGAAAATGA GGTAGAAATG TGGGGAAAAC ATAATCCCAT GGAGAGAACA AAGAGCTGAA CACGTAAATG 000880
000881 CCTCCGGCGT GCCTGGCAGA GAGAACACTC AGGCTGAGAG AAGGGACAGT GACTTGTACC AAAGGTAGGC AAGTAGCCTC 000960
000961 TGGGGTCTCA ATCAGCAGGG CATCTGGTCA ACCCTTCAGA CAAAGTCAGG TCTGAGCAGG CAAG
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Predicted Small Protein

Name NONHSAT078950_smProtein_539:733
Length 65
Molecular weight 7177.3332
Aromaticity 0.0625
Instability index 41.8203125
Isoelectric point 9.73187255859
Runs 9
Runs residual 0.00796875
Runs probability 0.0286266658816
Amino acid sequence MQASASLMQGKTAISWSAQSWHLGEGPGCRKPGLGRKRCCKLDFCRTVWMPLENTQKRAE
CPPR
Secondary structure LLLHHHHHLLLEEEEEELLLLLLLLLLLLLLLLLLLLEEEELLLLEEEELLLLLLLLLLL
LLLL
PRMN -
PiMo -