NONHSAT096764
Revision as of 05:51, 13 October 2014 by 73.162.128.239 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT096764 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
725 nt |
Genomic location |
chr4+:70272649..70273373 |
Exon number |
1 |
Exons |
70272649..70273373 |
Genome context |
|
Sequence |
000001 TTGTCTAAGA AATGGGCTTT TTTGTTTCTT ATGCTGACAG TTGTATTTTA GCCCTGAATC CTGCGAGAAT GTGCTGGTGT 000080
000081 GGCCGATGAA ATACAGTCTT TGTATCAATT TAATGTTGAT ACTTGATGAA CTTGCTCAGA ACACCATGAG GTAACTGTGC 000160 000161 TTGTCACCTT CAGCTTCCAT CCTCATTGAT TCCAACAATC TGCTGTTAAA TTTGAGGTTT ATCCCACATC TTTTACTCAG 000240 000241 AATGAACTTG ATTTCCTTTT TATGAAATTG ATCAATATAT GGATGTATAA GTTTCCAAAG AGTACATTGT TGGCATATGA 000320 000321 TTCAAAGATG CAAAAACTAC ATATCATGAA TGTTCTGATA CTGTTCAAAA GCTCTTTGAG TATGCTGTTT TGAACAAGAA 000400 000401 AATTATGAGG AACAGGATTC CAGAATTTAT GTCATTCTTG CAGATGTCAG TTCTCAGTAG TGAGCTGCTA TCTGAACAGC 000480 000481 TTAGTCTGTT AAACATTTGT TATACATTTG GTCTACTATC ATCAATTTAC AACTGGCAGT ATGTACCAAG AACTCTGTGG 000560 000561 AGGACTTACA TTACCTCCTT CTGATGTAAC TGTTGTCATA TCAGAACTTA GTACAAAAAT ACATTTGTAG AAAGGTGAAA 000640 000641 AGTCTGTTGC ATTTTCTTCA TTTTGACTTT GCATTTGAGA TTTTTAACAA AAAGAAGTGG GATCAGTTTT ACAGTGAAGT 000720 000721 ATTAG |
Predicted Small Protein
Name | NONHSAT096764_smProtein_404:583 |
Length | 60 |
Molecular weight | 7089.1956 |
Aromaticity | 0.169491525424 |
Instability index | 60.9084745763 |
Isoelectric point | 7.91619873047 |
Runs | 10 |
Runs residual | 0.0250349867828 |
Runs probability | 0.0597244303126 |
Amino acid sequence | MRNRIPEFMSFLQMSVLSSELLSEQLSLLNICYTFGLLSSIYNWQYVPRTLWRTYITSF |
Secondary structure | LLLLLHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHLHHHHHHLLLLLLHHHHHHHEELL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLL |
PiMo | oooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiii |