NONHSAT015487
Revision as of 11:55, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT015487 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
810 nt |
Genomic location |
chr10+:90750717..90768754 |
Exon number |
4 |
Exons |
90750717..90751113,90762786..90762951,90767457..90767594,90768646..90768754 |
Genome context |
|
Sequence |
000001 GGCAAAGTGG GGCGGGCGCG GGACGCGTGC GGGATTGCGG CGGCAGCGGC GCACGCGGGC ACCTGGGAGC GGCGGGCTGC 000080
000081 TGCGGGAGGC GTTGGAGACT GGCTCCCGGG GGCTGTTAGG ACCTTCCCTC AGGCCCGGGT GCTCAGAACG CTGGAGGACT 000160 000161 TGCTTTTCTT GGGCCTTGAT GCGAAGTGCT GACCCCGCTG GGCAGGCGGG GCAGCTCCGG CGCTCCTCGG AGACCACTGC 000240 000241 GCTCCACGTT GAGGTGGGCG TGGGGTGCGG ACAGGAATTG AAGCGGAAGT CTGGGAAGCT TTAGGGTCGC TGGAGGGGGA 000320 000321 CCCCGGTTGG AGAGAGGAGC GGAACTCCTG GACAAGCCCT GACAAGCCAA GCCAAAGGTC CGCTCCGGCG CGGGTGGGTT 000400 000401 CTTACGTCTG TTGCTAGATT ATCGTCCAAA AGTGTTAATG CCCAAGTGAC TGACATCAAC TCCAAGGGAT TGGAATTGAG 000480 000481 GAAGACTGTT ACTACAGTTG AGACTCAGAA CTTGGAAGGC CTGCATCATG ATGGCCAATT CTGCCATAAG CCCTGTCCTC 000560 000561 CAGGTGAAAG GAAAGCTAGG GACTGCACAG TCAATGGGGA TGAACCAGAC TGCGTGCCCT GCCAAGAAGG GAAGGAGTAC 000640 000641 ACAGACAAAG CCCATTTTTC TTCCAAATGC AGAAGATGTA GATTGTGTGA TGAAGGACAT GGCTTAGAAG TGGAAATAAA 000720 000721 CTGCACCCGG ACCCAGAATA CCAAGTGCAG ATGTAAACCA AACTTTTTTT GTAACTCTAC TGTATGTGAA CACTGTGACC 000800 000801 CTTGCACCAA |
Predicted Small Protein
Name | NONHSAT015487_smProtein_527:706 |
Length | 60 |
Molecular weight | 6242.3193 |
Aromaticity | 0.0169491525424 |
Instability index | 48.5423728814 |
Isoelectric point | 9.18438720703 |
Runs | 9 |
Runs residual | 0.0080858342404 |
Runs probability | 0.0413158256297 |
Amino acid sequence | MMANSAISPVLQVKGKLGTAQSMGMNQTACPAKKGRSTQTKPIFLPNAEDVDCVMKDMA |
Secondary structure | LLLLLLLLLLLEELLLLLEELLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHLHHHHHLL |
PRMN | - |
PiMo | - |