ENST00000437829.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000437829.1

Source

Gencode19

Same with

lnc-DHRS7B-5:14

Classification

intergenic

Length

744 nt

Genomic location

chr17+:20841851..20861660

Exon number

5

Exons

20841851..20841973,20852416..20852754,20859507..20859666,20859947..20860022,20861615..20861660

Genome context

Sequence
000001 GTGCGCGCCT GCCTTGAGGC CAGGCCTCAG AGAAGGGTGT CCCAGATGTA GGCAAAGCGT CCTCCATGTG TTCCTGGAGG 000080
000081 ACCGTCCCAA GTCCTTCTCC ATTCTCCCAA CCTCTTGGGC CTGGAAGTCA GACAAGTACC GGTGATTGCC GGTTTCTTGT 000160
000161 CTGATTTTTG CACTTCTCTG GCAAGCTGCC CCCTCTGAAG AGTTGACTAT TTGGGAGTTA CTCACTGATG GTTCAGCCAC 000240
000241 TTCCAGAACC TACCCCAAGA GCAAGACTTG AAACCAACTC GCACCCTCAA AGCTCCGGAA GCCATTCAGT GTTTCCATCT 000320
000321 TGGCTGAGTG AGTTCTTCAC TGAAACTCAA TTTGACTTTG ACAGTCATCT AATGAGAACT CAAAAGTCAT TCTTGGTTCA 000400
000401 GCCACAGTCA AAGAACTTGC AGAGCATTCT CTGACGAGGT CCTCAAGGAC AACTGAGAGA AGGTCCCATT CCAGGTCTTG 000480
000481 CCCAAGTCTT TCTGATTGGT GGGACTTAAA TCACACCCAA AATTCCAGCT GCAGGAGAGC TCTGAGATTT CATCTTTCCA 000560
000561 ACCTCTGTGT GCTACGTGGG GGTTGGAGCA CTTGCTGACA AGCCTTGCAA CCACCATTGA CAGGATGTCC TCCACCTTTT 000640
000641 CAATCTGATT TGCTCTTTGC CATGCAGACC TGTGGATGAA GAGCCAGAGT CCTCCAAGGT GAAGCTGGAC TGAATATTTC 000720
000721 TGTCCATAAG ACTATTAGAA TCCC
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Predicted Small Protein

Name ENST00000437829.1_smProtein_227:433
Length 69
Molecular weight 7831.6792
Aromaticity 0.102941176471
Instability index 69.5661764706
Isoelectric point 6.23724365234
Runs 11
Runs residual 0.0212639109698
Runs probability 0.0281029692794
Amino acid sequence MVQPLPEPTPRARLETNSHPQSSGSHSVFPSWLSEFFTETQFDFDSHLMRTQKSFLVQPQ
SKNLQSIL
Secondary structure LLLLLLLLLLLLEELLLLLLLLLLLLLLLLLHHHHHHHHLLLLLLHHHHHHLLEEEEEEL
LLLHHHLL
PRMN -
PiMo -