ENST00000446372.2
Revision as of 12:06, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000446372.2 |
Source |
Gencode19 |
Same with |
lnc-C10orf31-7:8 |
Classification |
intergenic |
Length |
693 nt |
Genomic location |
chr10-:10826402..10836877 |
Exon number |
4 |
Exons |
10826402..10826632,10828608..10828698,10834335..10834488,10836661..10836877 |
Genome context |
|
Sequence |
000001 CTTGGCAGAG AGCGCCCTGG GAAATGCGGA TATAGAAGGT CAGGAGAACA TCTCTCCTGG TTATACAGCA TTCCAGGTGG 000080
000081 GCTTTCATGT GGTTGAGGAT AATATCATTA GCACCAAAGG TGAAAATCCG TGGAAGCTCA TCTTATTTCA GCAGAAGAGT 000160 000161 AGGATGGGCC TTGTGGCACG AGTAAGCCAA ACAAGGGAAA GGCATTCACC ATCAATTGAC TCCTCATCTG TTTTTAAGAG 000240 000241 GGAAATCTGA GTTTTCAAGG AAAGCCGAAT ACAGTTGCCA AGTTGCCAGT CAAAGAAACA ATGTCAACAC CTGCTCATAG 000320 000321 AGATGGAATT CCTAACCCGG AATATTGCCC TTGAATTACA ACGAGAAAAA GCACCTCTTC AAGTGAGATG GCAGACCACC 000400 000401 TCAGGATGGA AATGTATTTC TTCATCCCCC TCTCTACTTC CCTGTGACCT CCTGCAAATA AGGGAGAGAC AAAGAGAAGA 000480 000481 GCAGAAGAAC AGAAGAATGG AGTGGCAAAG AGAAGAGAAG GAGTGACTGA ACATTGACAA GACTTTGGTT GGGGATGGTC 000560 000561 AGAGAGGAGA TTAGCTGCTA GACGGCCACA CTGCGGAGAA AGATCATTTT CCCACTCCAT CCCCCTTCCA GCTCCCCATC 000640 000641 CATCTCACCA AGAGCCAGCT CCACCACTCA ATAAAACCTT ACATTCATCT TTC |
Predicted Small Protein
Name | ENST00000446372.2_smProtein_86:184 |
Length | 33 |
Molecular weight | 3831.4964 |
Aromaticity | 0.15625 |
Instability index | 63.984375 |
Isoelectric point | 11.567565918 |
Runs | 7 |
Runs residual | 0.0271045918367 |
Runs probability | 0.0238852297676 |
Amino acid sequence | MWLRIISLAPKVKIRGSSSYFSRRVGWALWHE |
Secondary structure | LEEEEEELLLLEEEELLLLHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |