ENST00000457407.1
Revision as of 10:13, 16 October 2014 by 192.168.72.52 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000457407.1 |
Source |
Gencode19 |
Same with |
lnc-MFSD6-1:1,NONHSAT076089 |
Classification |
intergenic |
Length |
404 nt |
Genomic location |
chr2+:191399581..191432828 |
Exon number |
3 |
Exons |
191399581..191399847,191400607..191400713,191432799..191432828 |
Genome context |
|
Sequence |
000001 CGGGCCCAGG CCGGAGGAGC TTTCGGTGGC GCGACCCCGC TGGCATGCTC CCGGCCTCGG CCTCGGCCTC GGCCTTGGCC 000080
000081 TCCGGGCCTC CAGCGCACGC GGGGCGTCCA GGGCCTCATC TTCCCCTGGG GACCGCCCGG CCGTGTCCCG CTGCCCTCGG 000160 000161 CGCAGGGGTG GGAGTTGCAG AGAGGAAGAG TCGCTAACCC GGAGTGTTTC TTAAAACTTG GCTGACCTGT GACCTGCGGA 000240 000241 TTTGGAGGCT GAATTCTCCG AGCACCTGTG CGGTGTGCAC TTGCTTCTTG CAAGACAGCT TTTGTACCTA ACCACATTCA 000320 000321 TTTTGATTTG GTTTAATTTT GGATGGCACT ATGGAAAGTA GCTAAAATAA ACAGGAAGCT ACTGCAGGAT ATAATCTAAG 000400 000401 AAAA |
Predicted Small Protein
Name | ENST00000457407.1_smProtein_44:196 |
Length | 51 |
Molecular weight | 4738.4178 |
Aromaticity | 0.0 |
Instability index | 40.02 |
Isoelectric point | 11.5405883789 |
Runs | 7 |
Runs residual | 0.0246783625731 |
Runs probability | 0.0376258611552 |
Amino acid sequence | MLPASASASALASGPPAHAGRPGPHLPLGTARPCPAALGAGVGVAERKSR |
Secondary structure | LLLLLLLHHHHLLLLLLLLLLLLLLLLLLLLLLLHHHLLLLLLEEEELLL |
PRMN | - |
PiMo | - |