NONHSAT004274

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT004274

Source

NONCODE4.0

Same with

,

Classification

sense

Length

584 nt

Genomic location

chr1+:87199927..87204378

Exon number

3

Exons

87199927..87200374,87200762..87200862,87204344..87204378

Genome context

Sequence
000001 CTGGTCATCT TAAAATTTTG TAAAATAGTA AAATTTAGCA AAATTGATAC TAGAAAATTT ATGAAAATAT CTTGGCTTTC 000080
000081 TCTTAGTAGT TTTTGTAGGC TCTTAAGAGT GTATCATTAA GCTTTAGCGT AACAGATTCT TTTCAATCAA GTACTGGAAT 000160
000161 CAGTTGTCCA GGTGGAGTAA TACAGAAAAG CTAAGGTCTA GAAACCAGGG GACCATTTTA GATACAAAGC AGAATTGCGG 000240
000241 AATTGCCAGA TTATAACTTG AGGTTTGTTC GGGGGATTTT TTTTAACCAT CTAAAATAAA TGTATATAAG ATGGACTGAG 000320
000321 TCTTCTAAAG AGATTCTAAA ACTATATTCT TACTTAAGTC TGAACAGGAA TTAAGAATAA CTCAAAGTGA ATTTGATCGT 000400
000401 CAAGCAGAGA TTACCAGACT TCTGCTAGAG GGAATCAGCA GTACACATGC CCATCACCTT CGCTGTCTGA ATGACTTTGT 000480
000481 AGAAGCCCAG ATGACTTACT ATGCACAGTG TTACCAGTAT ATGTTGGACC TCCAGAAACA ACTGGGAAGa gacagagttt 000560
000561 cactcttcca gtccaaggtg gagt
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Predicted Small Protein

Name NONHSAT004274_smProtein_299:373
Length 25
Molecular weight 3008.4487
Aromaticity 0.166666666667
Instability index 75.2458333333
Isoelectric point 9.39739990234
Runs 5
Runs residual 0.0267857142857
Runs probability 0.0183006535948
Amino acid sequence MYIRWTESSKEILKLYSYLSLNRN
Secondary structure LEEEELLLHHHHHHHHHHHHHLLL
PRMN -
PiMo -