NONHSAT033913

From LncRNAWiki
Revision as of 10:17, 13 October 2014 by 73.162.128.239 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT033913

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

815 nt

Genomic location

chr13+:52027477..52028966

Exon number

2

Exons

52027477..52027554,52028139..52028966

Genome context

Sequence
000001 AGCGGCGTCC GCGCGCGCGG GGCGGCCGCG GCGGTGAGCC TGCGCGTCAG GGCCGCTGGC CTCTCCTTGG CTGTTGGAGA 000080
000081 GCCATAGAAT ACCTGTTTCA GAGCTGAAGG GGACCTGAGC CCATGATAAT CCATTACCTC GTGAGAAAGC GGAAAAACTG 000160
000161 ACTTCAGCTT GCCCAGATGG CGCAGAGAAT GGGTTTCCCG TAACCCCGCC TGTGTCTTTC CTTCAGCCTC GTCCCAAATG 000240
000241 CCGTGGGAGG GAAGGCACTC TCTGTCAAGC TGCTGTCACC TTACCTGAAG TAAGGAGTCC ACGCCTGCAT GTCCGAGGAA 000320
000321 AACAGTTTTC TCAAACACAT TAGTTGAAAA ACTGAAGACG CTACCTAAAA TACAAGCTGA GTTAGAGACA GCCCTTGTAA 000400
000401 GACTAGGTAG GTATTTACAG GGCCTCTCCC ACTAGCTTTG TTTTTCCAGA GTTTGTTCTT TATCCGGAAA TTCTTAATTT 000480
000481 GCCTACTGAT CATTTAAAGA AAGGGTTCTA TTAACATTGA CACAGAAGAG ACACTTTGTG GCACTTTTTA AAAATCTGAG 000560
000561 TCTCGTGACT TGGTATAACT TCTGAAACTT ACTGTTAATT TATAGCAGAG CTATTTGAGT AATATGCTCT TCTATGAGTA 000640
000641 TGAACAATAG AAGAAGTGTG ATTTTTAAAG TGATTTGGAC TACAAAATAA GAGCATGGAA TATAGGCTTT ACAGCCAGTA 000720
000721 CTTGCTGAGG ATGTACTGTG TATTAGGTGT GGTGCATATA AAAAATAAAT AAAATGTGGT CCCTGTCTTC AAAAAAAAAA 000800
000801 AAAAAAAAAA AAAAA
[back to top]

Predicted Small Protein

Name NONHSAT033913_smProtein_122:160
Length 13
Molecular weight 1570.9462
Aromaticity 0.0833333333333
Instability index 83.2333333333
Isoelectric point 11.0969848633
Runs 4
Runs residual 0.0166666666667
Runs probability 0.00865571453805
Amino acid sequence MIIHYLVRKRKN
Secondary structure LEEEHHHHLLLL
PRMN -
PiMo -