NONHSAT035017
Revision as of 10:41, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT035017 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
452 nt |
Genomic location |
chr13+:103453844..103459673 |
Exon number |
2 |
Exons |
103453844..103454117,103459496..103459673 |
Genome context |
|
Sequence |
000001 ccacccgcct cagcctccca aagtgctggg attacaggtg tgagccacca cgccGGCTTA GTAAATCTTA ATATAGCAAC 000080
000081 ACCTCACTTG CCTGGAAGAG GGAACCGCAA TCAATCAAAA TGagggccta cagtaatgcc tggcatgatg caaacactta 000160 000161 aaaattatct gttgaatgaG ACGTCTACAA ATCCTAGGCC CTGGGGATAC AATAATCTGG AAAACCAGAC TTGCAGGATG 000240 000241 CAGACGTTGA TCATATGAAC AGATATGCAC AGAAGAGCTC ATTTTGCAGC TCTCAAGCTT TTATAGCATG CTGTAAACAA 000320 000321 TTGTCAAAGT TGTTTATCAA GAAACAGATA GAGTTGCAAC TTGTTTCTAG TAATAGAAAC TTTTACACTG CATTCAATGC 000400 000401 CTAACGTTGC AGAAACAGAA AGGTCAAATG ATTCTGGAAA TGGTGAGCAC AA |
Predicted Small Protein
Name | NONHSAT035017_smProtein_254:403 |
Length | 50 |
Molecular weight | 5657.5274 |
Aromaticity | 0.142857142857 |
Instability index | 63.9553061224 |
Isoelectric point | 9.73358154297 |
Runs | 7 |
Runs residual | 0.019194704909 |
Runs probability | 0.0293612940672 |
Amino acid sequence | MNRYAQKSSFCSSQAFIACCKQLSKLFIKKQIELQLVSSNRNFYTAFNA |
Secondary structure | LLHHHHLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLEELLLLL |
PRMN | - |
PiMo | - |