NONHSAT037488
Revision as of 11:46, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT037488 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1125 nt |
Genomic location |
chr14+:69070537..69075605 |
Exon number |
2 |
Exons |
69070537..69071064,69075009..69075605 |
Genome context |
|
Sequence |
000001 CGGCCGCGCT GGCCCCCTGT CCGCATGCTG TCAGGCTACC TCCGTGCCAG ACGACCAACA CCCAGCCACA GTGGAAATGA 000080
000081 CTGTTCCTTC AACTTTCTTC AGCCCCTGCC TGCTGGGGTC TCCGGAGGGA AGCGTTCACT CTAGCCCAAA TGAAACAGAG 000160 000161 CTCCAGAAAA ACCACAGTGG AGGCCACAGC GGCCTCAGGC CCTGAACTTT GTATTTCTTA GCCCGCCAGG ATTGCTGGCT 000240 000241 GCTGGGTGTC ATGTAACTCC CAAAAATGTG AAGGGAAAAC CAAAGAGCCT GAGAAGCGCA GACGTCTCCT GGCTGGGGAG 000320 000321 TCCGTCTAGA AAGTCGCCTT TCATGGTGAG GCCAGGTGCA CGCGAGAGTG GCTGGAGAAG GTGGGGTGAG CCCAGAACAG 000400 000401 GGAGGCCCGG CCCACTCCCA GGCTGAAACT CCGAGAAACT CCCCCTGCAC AAGGCCACGC CAATGAAGTC CCCTTCCTTC 000480 000481 TGGAAAGGGT CCTACACAAA TTGCTAGGGT TTCCAGTGTG ATATTTGACG AGTGGGGCGT CCAGCTGTGC TGTTGGCTTG 000560 000561 TCTCTCTAAG AGGGGAAGTG CTGAGGGCCT GTCCCCCACC ACCACCCCGA GTCCTTCCCT AGTGAGAGTT CCCTGGCTTG 000640 000641 GGAGCACGCA GGAGATGCTC GGCTTCAGAG GGGCCTTGCT TGAGCGTGGT GAGGAAGTCC CGGGGCTGTG AAAGAGGAAA 000720 000721 TGCTGGACTC TCCCTGCCTA AGGGCCTGAC CTAGAATGGG GCTTTAACCT CCCTGGAGGA GGAGAGCAGC TGCAGGTAGC 000800 000801 TGGCGGCTGC AGAGTACTCC TGGGCAGGCT GTAGGGCCAT GGGTCAGTAG CTGAAGGAGC CACCTTTCAT GCCCTCCCCT 000880 000881 CACCATCACA GTTCCCGGGC ATGAAACTCA GGCATCAGCA CCTCAGCCCA GGCCCTCAAG GAGTGGGGTT AAGTGAGCAT 000960 000961 GAACAGAGCA GGCCCCCTTT GCCTCTGGGA GCCTCCTGGC TTCCCAACAG GTGCTATCGC TGAATGAAGA GGAGGGCTGT 001040 001041 CCACAGCAGT TTCCCCAGCC AAGGCTCTGG GCTCCAGCCC TGCTGGTCCC TCTTCCTCTG TCACCCATCA GCTCTGCAGC 001120 001121 CGGCC |
Predicted Small Protein
Name | NONHSAT037488_smProtein_149:220 |
Length | 24 |
Molecular weight | 2395.709 |
Aromaticity | 0.0 |
Instability index | 63.252173913 |
Isoelectric point | 7.95465087891 |
Runs | 5 |
Runs residual | 0.0103519668737 |
Runs probability | 0.0471294824237 |
Amino acid sequence | MKQSSRKTTVEATAASGPELCIS |
Secondary structure | LLLLLLLLHHHHHHLLLLLEELL |
PRMN | - |
PiMo | - |