NONHSAT047306

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT047306

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2284 nt

Genomic location

chr15+:75628362..75632614

Exon number

2

Exons

75628362..75628433,75630403..75632614

Genome context

Sequence
000001 GTGATCGTCG ACTCAGCTGA CCCTGCGGGA CCGGAAAAAG AAATTCCCGG GCCCTGGCTT CTTGGCGCGA TGAGGTTCCG 000080
000081 GTTCTGTGGT GATCTGGACT GTCCCGACTG GGTCCTGGCA GAAATCAGCA CGCTGGCCAA GATGGTTGAG TGCACAGGGT 000160
000161 CTAGTCTGGG TGGAGGAGGG GTGTTGGGGG TGGGGATTGT GGGTGTAGAG GATGGTGAGG TTTCTCTGGG GCTAGGGCCT 000240
000241 CAGTGCTCTC AGCCTGTGCT ACCATGCTTT GTGACCTTGA TCAGTGGCTG GCCTGCTCTG AGCCAGTCCC CAGGAAGGAG 000320
000321 GGGTGAGGTT TGCCAGCCTG GCTGATGTAA GGACTTCCCT TCCAGTCCTC TGTGAAGTTG CGGCTGCTCT GCAGCCAGGT 000400
000401 ACTAAAGGAG CTGCTGGGAC AGGGGATTGA TGTGAGTACA AGATCCAGCA CCCCATTGTC CCATGACCTT ATGACCACCA 000480
000481 CTGCCCTGAA ACTCTGCACT AGGCCCAGGG AGACGGGTGA GCCAGCCTCT CAACCTCTCT GGGCACCTCC CTTCCTTCTT 000560
000561 TCCAGCCTGT CTGTTCCTTA TCGCAGGATC CAGGCTGGGG GTGAGGGGCT GGTGAGCAGG GGCCTGGCAC CCCCTGAAGG 000640
000641 TCTCCTTTCC CCATAGTATG AGAAGATCCT GAAGCTCACG GCTGACGCCA AGTTTGGTGA GTATCCCGCT GAGTCTATAG 000720
000721 GCCCCAGGCA ACCCTGGGAA CTTGGCCTGG TGCCTGGTAC AGAGGGGCCC CCCACCCCTC CCAGCAGCAT CCTTAACTTA 000800
000801 CCTTCCCTAG TGGAGGAGCA TGAGGGAAAG AAAGACCGAC AGTCCCACCT TCCTGTCCTC TGCCAGCTCC TGGTGGAGCA 000880
000881 GTAGCAGTGC CTGTGGCTCC AGGAGGCCTG GGGGCTTTGA GCTAAAGTTA ATAGGGCAAC AGGGAGGTGG CTGGACCCAC 000960
000961 AGTGACACCC CCTGCCCCAC CCACGGGTCC CTCAGAGTCA GGCGATGTGA AGGCCACAGT GGCAGTGCTG AGTTTCATCC 001040
001041 TCTCCAGTGC GGCCAAGCAC AGTGTCGATG GCGAATCCTT GTCCAGTGAA CTGCAGCAGC TGGGGCTGCC CAAAGGTACG 001120
001121 GGTTGTGGGT GGGCAGCTGG GCAGCCTGTG GGCCAAGGGC TGCTAGAGAA GGGGACAGGC CCTGTGACCC TGAGGTGTAC 001200
001201 CTGCCCTGTC TGGGCCAGGA GCCCAAGCCA GGCCCCGACA TGCTACCTCC AGAGCTACTC CATTCTACCC CCAGAGCACG 001280
001281 CGGCCAGCCT GTGCCGCTGT TATGAGGAGA AGCAAAGCCC CTTGCAGAAG CACTTGCGGG TCTGCAGCCT ACGCAGTAAG 001360
001361 TATGAGGCCA GCCAGGGTCC GGGCTCATTC TAGAAGGTGC ACGCAGCACA CAAAGTgcat ggagagtcca gggagacgac 001440
001441 ttaaccacgg tcacatggtt actagcagcc gtagagctgg gacctggccc tgggtctcct gactccccac aaggtttctt 001520
001521 gtcactgAGG TCTGCTGTGG GTGATCAGAA CTGATTATCG GGCACCTGCC CTGTTCTGAG CCTGGGTCAG CAGGATGGGA 001600
001601 GCTTCTTAGA GGCCACATAG CCTTGAATGG TTGAGAGCTG AGCCAGGGTG TCGGCTGAGG TCTACTTGGC TTGCCTGCTT 001680
001681 TGATCCTGAG AGCCACCCAC CCCATCTCAC AGTGAATAGG TTGGCAGGTG TGGGCTGGCG GGTGGACTAC ACCCTGAGCT 001760
001761 CCAGCCTGCT GCAATCCGTG GAAGAGCCCA TGGTGCACCT GCGGCTGGAG GTGGCAGCTG CCCCAGGGAC CCCAGCCCAG 001840
001841 CCTGTTGCCA TGTCCCTCTC AGCAGACAAG TTCCAGGTCC TCCTGGCAGG TGAGGCTCAG CTATTCCTCG ACGGGTGAGA 001920
001921 GGCTCTCCCA GATCCGCCTG ACTGCCTCCC ACCTGCCCAC CTCTTCCCTC TGCAGAACTG AAGCAGGCCC AGACCCTGAT 002000
002001 GAGCTCCCTG GGCTGAGGAG AAGGGTGTTC CAGGCCTGTG TGGAGCCGCC CTGCCCGTAT GGAGTCACGC CCTCTGAACT 002080
002081 GCTCTTCGGG AGGCAGCCCT GGTTCTAGGA TGCTGAGGCC CTGGCCCGGA CTCTGGCCTC CCAGATCCCC AGCTGCCTCA 002160
002161 CTTCTCTCTT GAGAACTTGG CTCAGGGCTC CTGAGGACCT TTCCCAGCAT TACCTTCCCT TCCCTTGAAA GGCAATTGTT 002240
002241 GGCTGTTTTC ATAAGCAGGA AAAATAAACA GAAGTATAAA GGAA
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Predicted Small Protein

Name NONHSAT047306_smProtein_1301:1501
Length 67
Molecular weight 7454.548
Aromaticity 0.0454545454545
Instability index 83.2878787879
Isoelectric point 11.8607788086
Runs 9
Runs residual 0.0142442387951
Runs probability 0.0279200769397
Amino acid sequence MRRSKAPCRSTCGSAAYAVSMRPARVRAHSRRCTQHTKCMESPGRRLNHGHMVTSSRRAG
TWPWVS
Secondary structure LLLLLLLLLLLLLLLLEEEELLHHHHHHHHLLLLLLEEELLLLLLLLLLLLEEELLLLLL
LLLLLL
PRMN -
PiMo -