NONHSAT056930

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT056930

Source

NONCODE4.0

Same with

,

Classification

sense

Length

722 nt

Genomic location

chr18+:2577848..2582525

Exon number

4

Exons

2577848..2577868,2577968..2578140,2578926..2579028,2582101..2582525

Genome context

Sequence
000001 TGTATTCGAC AACTCTGTGA GTTTCTTACA GAAAATGGTT ATGCACATAA TGTGTCCATG AAATCTCTAC AAGCTCCCTC 000080
000081 TGTTAAAGAC TTCCTGAAGA TCTTCACATT TCTTTATGGC TTCCTGTGCC CCTCATACGA ACTTCCTGAC ACAAAGTTTG 000160
000161 AAGAAGAGGT TCCAAGAATC TTTAAAGACC TTGGGTATCC TTTTGCACTA TCCAAAAGCT CCATGTACAC AGTGGGGGCT 000240
000241 CCTCATACAT GGCCTCACAT TGTGGCAGCC TTAGTTTGGC TAATAGACTG CATCAAGagt cttgctttgt tgcccaggct 000320
000321 ggaatgcagt ggcatgatct cagctcacta caatctccac ctcccaggtt caagcaattc tcatgcctca gcctcccaag 000400
000401 tagctaggat tacaggtgcc caccaccacg cccagctaat ttttgtattt tcagtagaga cagcgtgtca ccatgttggc 000480
000481 caggctgatc ttgaactcct gacctaaggt gatccacctg cctcagcctc ccaaagtgct gggattacaa gtgtgagcca 000560
000561 ccatgcctgg ccatgtagtt ttcttaatat caaacaacat attttttatc aatgccatgt gttttgttac tatgatgaac 000640
000641 agactctctt tttttaattc tatttccatg gtgattatta ctaAAAGAGT TTTTTGTGTT TACTACCCTT ATTGAATTGC 000720
000721 TT
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Predicted Small Protein

Name NONHSAT056930_smProtein_248:406
Length 53
Molecular weight 5704.4384
Aromaticity 0.0769230769231
Instability index 83.0826923077
Isoelectric point 7.79718017578
Runs 7
Runs residual 0.0157540199913
Runs probability 0.0474424003835
Amino acid sequence MASHCGSLSLANRLHQESCFVAQAGMQWHDLSSLQSPPPRFKQFSCLSLPSS
Secondary structure LLLLLLLHHHHHHHHHHHHHHHHHLLEEELLLLLLLLLLLLLEEEEEELLLL
PRMN -
PiMo -