NONHSAT077885

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT077885

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

712 nt

Genomic location

chr2-:242028682..242033847

Exon number

5

Exons

242028682..242028780,242029395..242029459,242029693..242029864,242031310..242031529,242033692..242033847

Genome context

Sequence
000001 CAGCCTCGTC TTACAGCGTG ACTGCAAAGA AAAAGACTTT TGTTTTGCAA AAGAAAAGCA GCTCGGTGAC TCCGTCCACA 000080
000081 TCGCCACAGT TGAGTCAGAT GGCAGTGGCA GTCCTTTGCC AGTGGAAGGA GTTCCTGCTA AGGGGAGGTG CAGGAGCCCC 000160
000161 TGCCCCCGTC TCTGTTTTGG AAGTGGTCCA TCACAGTTCC TTCTCAATTT GTTGGGCCTC GAAGGGAGAA TTCTTTCTCT 000240
000241 GGCTTTGGAG TCTAAGAACA GGTTTCTGCA TACTGCAGAA GCGTGGCTGA CTGACAGCCT CACTGATTCC GGGGAATGGC 000320
000321 GAGCTGTCAT CTCATCCGCA GAGACACAGA CTACACCTTC AGGAACTGCA GCTTGGagtg tactccttct acttatgaaa 000400
000401 aaaagttaac tataaaatgg cctcaggcag gtccttcagg aggtttccag aagaaggcat cattgtcaca ggaggtggca 000480
000481 gctccatgtg tgttactggg acacgatgtg gaagtggaag aaggtgacat ggatgatcct gcccctgtga CTAATTTATT 000560
000561 ATTGTgcaac tgccagtcct gcgcattcca gctacgctaa gcgccctgcc cagGCACGTA ACAAAACATA GACCTGTTTT 000640
000641 GAAGTGGCTT GTTACCCAAG GGTGCCTCAC TCATCTGCGC CACCAGGAAG ATGAACTGTG AGGGCTCCTA TA
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Predicted Small Protein

Name NONHSAT077885_smProtein_98:289
Length 64
Molecular weight 7023.2369
Aromaticity 0.142857142857
Instability index 48.9349206349
Isoelectric point 9.09930419922
Runs 12
Runs residual 0.0455134434726
Runs probability 0.0430577636461
Amino acid sequence MAVAVLCQWKEFLLRGGAGAPAPVSVLEVVHHSSFSICWASKGEFFLWLWSLRTGFCILQ
KRG
Secondary structure LEEEEHHHHHHHHHHLLLLLLLLEEEEEEEELLLEEEEELLLLHHHHHHHHHHLLLEEEE
ELL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLL
LLL
PiMo oooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiii
iii