NONHSAT091276
Revision as of 10:30, 16 October 2014 by 192.168.72.52 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT091276 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1273 nt |
Genomic location |
chr3+:114070651..114108012 |
Exon number |
6 |
Exons |
114070651..114070803,114074900..114075028,114085543..114085645,114085814..114085875,114106371..114106426,114107243..114108012 |
Genome context |
|
Sequence |
000001 CGAGCACGGA ATTGCTGAAG TTGTGAAGGT TGATGCTGTG AATGCGCTCG GTCATCCCCT TGCAACTGAT GTCACCTGCA 000080
000081 GCATGTCAAC GCAGACACAA AACAGGGCAT GGGTCAGATC TAGCTGGTTG CATTCCTAAC ACCTAGGTTT CAGAGTAAAA 000160 000161 ATACAGAGTC AGCTTGTGAT GGCATTCCCT CAAAACATGG AAGGAATTGC AGTAATGAAA GTCATCATGT ATTCTAAGAG 000240 000241 ACTGTTCTGC GAGAGCACAA CACAGACGGG GCTAAAGCAG GGTGAGAAGC AAAAGTGCTC AGGAGTTAAG AGAAGCAGAC 000320 000321 GTCCGAAATT ATCTCCATGC ATTACCAAAA ACCGTGGGCA CCACGGCACG GGGAAAACTT ACCAGACAAC TCTCATGCCA 000400 000401 TCAAGCCGAC GGACTTTCAA AAAAATAAAA GATGCATTTC TTTACTTGCA ACATCAGCTC CTGATTTCTA GGTCTGGATC 000480 000481 TGGGTTCTCT GTAGCACAGG AAGGTCTCTA CTTCTCCTAC ATAAATGCCT TGCATGGCGG GAACTAAATC AACTACACAG 000560 000561 ACCCATACAT CCAGAGAGCA GAGGTGAGCT GGATACAAGT GGCTTAGAGA TGTGGTGGAA GGAGGCCAGA GCTCCAAGGG 000640 000641 AAGGGCAGCA AGGAGACAAC AGCATGGGTT GCAGCTCAGA CAACAGGTAA ATAAAACCAA GCAAAGCTGC TGGTCACAGA 000720 000721 TTTGACCAGG GTGGCAAGAA ATGACAAGCT ACCATGAGAT TCAACAGTGG CACGGAAGGA TGATGAGAAG CAAACAGATT 000800 000801 AGGAGAAGCT GCCACCACCG TACATAGAGG CACAGATGAC CAAGCAGAAC AGCACCAGTC CCTGCAAGGT GTGCTCAGAT 000880 000881 ACAGCTCAGC ACAGCCATCT GGCCAGGAGG GAATGATAAT GCACATGGTG TGCACTGCAG CCGGGAAGTT GAGAACCGCT 000960 000961 GTGGGCACCT CAGGACTGAG TCTGGTTACC CTGCTGATCC AAGAAATGAA GCCATCTAAA ATTTTGCCTG CTTTCACAAT 001040 001041 TTTCTGTGTG TGTGTGTGTG TATTAAACAA AGTGAACTAA GAAGCCTTTT ATTGGAGACA TAATGTACTC ACAGTAGTTT 001120 001121 CAAAATCAAT GGTGTCACTC TTCAGGTAAA TTACTCCAAG GCTTGGGCCT AGTGCAGATG TTCATTGGGG CAGGGAGCAG 001200 001201 AGAGCGGCTG CATCTAGATC AGACAAAAAA CAAAAATAAG GTTGTTAAAT GAACAGGTGA TGGTGATGGC AAT |
Predicted Small Protein
Name | NONHSAT091276_smProtein_41:145 |
Length | 35 |
Molecular weight | 3647.2414 |
Aromaticity | 0.0 |
Instability index | 91.9558823529 |
Isoelectric point | 9.68841552734 |
Runs | 5 |
Runs residual | 0.0390915860015 |
Runs probability | 0.0307189542484 |
Amino acid sequence | MRSVIPLQLMSPAACQRRHKTGHGSDLAGCIPNT |
Secondary structure | LLEEELLLLLLHHHHHHHHLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |