NONHSAT092143

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT092143

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1662 nt

Genomic location

chr3+:131106007..131107668

Exon number

1

Exons

131106007..131107668

Genome context

Sequence
000001 AGTATGGGCA GGGCAGAGGA AAAATGAAAA ATGGGAAACC CCCATGGACT TAGGGCCCCC ACAAAGAGAA ACCATGTGCC 000080
000081 TTCTCCCCAC TTCCCTTCTG GCTTGGGCAA ATGAGGCTCC CTTTAGGGGT AGAGGTACTC TACAGGGGCT ATGTTCCCTT 000160
000161 TAGGGGTAGA GGTAGTCTAC AGGGGCCAGC TGGGCAGAGA TGAAATCTTG CAAAGGAACC CTTCTTACAC TCGAAAAGCA 000240
000241 AGAATAGCAA AGGGACTTTG GGAAGGACAT AAAACAAGAA AAGGAAGCTC CTCACCAACA GCTCCCAGAT GGAGGGAGTT 000320
000321 TGTGTGTCTA GCATTTTCAC CAAAGTGCTG CTCATCCTGA TGCACAGATG CAGATTGGAG CTGCTGCCTG TGCCCTCACC 000400
000401 ATGGGTATGT ACCCACCACA GGCATTCCCA GGTGATGCGG GGGCAGAGGA TTCCCTCTTT CCACTCAGGA TAACAACCCC 000480
000481 TCGATGGGGT TTTCAACAAG TATAGAAAGC TCCTGGACTC AGCCAAGACC CTCACCTACA GTCCCAGTCC TCCCACCTTC 000560
000561 TTCAGGTCTC TAGAAGACAG AACTGATGGG TTTACAACAT CCTATTATCC AGCACTAGTC CTAGGTTGTG GATGTAGGGA 000640
000641 AAGGCCAGGT AAACAAGGAA GGGAGAACAG GTGAATGACC CCAATTGTTT GAAACCAAAA GAGCAGAATT GCCCCTAATT 000720
000721 GATTTAAGTA AACAGCAAGT AACATAGGTC TGTTAAATAG AAGAGGATGT GAGCACCAGA TGCACGTGAT AAAGACCATG 000800
000801 CTCTGGAAGA TTCATTCCAA GGAGTAGAAG TGGTATTTAC TCAGGGCATT TAAGGAGAGC AGGGACTCTG AAATGAGGTG 000880
000881 AGAGAAAAGA TAAGACATGC AGGAACAGCT GGCAACACCA AGAAAGAATT TAAGGAGAGG GATCTCTCTG TTAGAGAACT 000960
000961 TAACATTACC CTAGGAACAG CAAGAGCATC ATCAGCCCCA GGAAAATCTA CCTCTGATAT GGAGACCAGG CTCAAGAAAA 001040
001041 TCCCCTAGAA CCCAGAGAAA AAGTGCAAAA CAAGGAAAAT GGCCAAAGAG AATATCATAG ATACAGAGAT CAGACAATGA 001120
001121 GAATCCAGAG TCTTGTTAAG TGATAGAAGG AAAATACTAA CAGAACACAT GTAACAGGAA CAACATTTTA GAGGAAACAG 001200
001201 GACAAAAACT TCCCTAAACT CAAGATACTA CACCAGAAGT GGGCAGTACT CACTATGTTC AGGGGAACAA AAAGATAAAA 001280
001281 ACTAAAAAGC ATCAGACTGT TTTTTGTGTG AAGGAAATTT GTAAGGTAGG AGAATTAGGT CACTTACTAC AGCACAAATT 001360
001361 GCATGTCTAT CTAAATTGAC GTTTAAGTGC AAAAGCATGG ATATTACTCA TGCAGTTTTA CTGGAAAACC ATACAGATGT 001440
001441 TTTTCAGGAA TGTACAGAAT GAATCAAAGG AAATAACTGA TCGACAGGAA AACTGTAGGA AATTTGTGGG CTGGCTGTGA 001520
001521 GGCAGTGGCT CCTATTATGT ACAATTTTAG TGCTAAGTAC TGTGTTAATG ATGGCTATCA AACAATATGT TAACATCTGA 001600
001601 AAGGAAATAT GTATATTGAG CATAATAAAT ATTTTATAAA TAACAATAAA TCATTTGATT TT
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Predicted Small Protein

Name NONHSAT092143_smProtein_308:472
Length 55
Molecular weight 6208.3639
Aromaticity 0.0555555555556
Instability index 56.7240740741
Isoelectric point 9.79620361328
Runs 10
Runs residual 0.0224932249322
Runs probability 0.0460166048401
Amino acid sequence MEGVCVSSIFTKVLLILMHRCRLELLPVPSPWVCTHHRHSQVMRGQRIPSFHSG
Secondary structure LLLEEEEHHHHHHHHHHHHHLEEEELLLLLLLEELLLLLLLLLLLEEELLLLLL
PRMN -
PiMo -