NONHSAT098640

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT098640

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2781 nt

Genomic location

chr4+:146578404..146581186

Exon number

1

Exons

146578404..146581186

Genome context

Sequence
000001 TCATTTCTCC TTATGTTGTC GTTGTACCAT TGGGTATTGT ATAGAGACCA ATTTCTAAGA GATTTTTTCA CCTCTGTTTC 000080
000081 TGTTATTTGC TATACTGGAG GTAATATAAT AATAATGAAA TATAGCTTTT TTTTCAACTC AGAAATCCTA TTCCCTCTCC 000160
000161 CCATCTGTGA TTATATTTTA CTGGACTTCT GACTTGGTCA AAAGCATAGG TTTTGACTTA GATACATGTG GGGGCAGATC 000240
000241 TCAGCTCTAT CACTAACTAG CTATATGATA TTTGGCAAGT TTTTTCTCTA TGTGCAGTAG TTTCTTTATC TGTAAAATTA 000320
000321 AGATAATAGC TACTTTACAG GGTTGGAAGA ATTAATTTAG AAATTGTACA GTGCTTAGCC TCAATAATTG GTAGGTGGTG 000400
000401 GTGTAAATAT TTTACATAGA TACTTGTGAC AGTTCTTTGT TCTACAAAAC AGACTAATAT TAATTTCAGA TTGGCCAAGC 000480
000481 TACTTAATTT CTCTGTGCCT CAGTTTCCTC ACTATTAAAT GGGGATGACA ATAGTGTCCA CCTAGAGCAG GACTATTTTA 000560
000561 GTATTACATA TAATCCTTGG ATATAAATGC TGATGAAGTT TGGATATTTG TCCCCACCCA AGTCTCATGT TGAAATGTAA 000640
000641 TCCCCAATCT TGGAGGTGGA GCCTGGTGGG AGGTGTATGG ATTAGATCAG ATCTCTCATG AATGACTTGG GCCATCCTTT 000720
000721 GGGTGGTAAG TGAGCTCTTG CTCCGAGTTC ACACGAGGTC TAGATCTGGT CATTTAAAAG TGTGTGGCAT CTCCCCATCC 000800
000801 CTCACTCTAT CACTTGCTCC TACTTTCGTC ATATGACATG CCTGCTCCCC TTTCACCTTC TGCCATGATT GTAAGCTTCC 000880
000881 TGAGGCCTCC CTAGAAGCTG AGCAGATGCC AGCACCATGC TTCCTGTAGT CTGTAGAACC ATAAGCCAAA TAAACATCTT 000960
000961 TTCTTTATAA ATTTATAAAT TACCCAGTCG CAGATATTTA TAGAAAGAAC AGCCTAATAC AGGTGCTAAA TACATATCTG 001040
001041 ACAATAAATG GTAGTTATCT CTTAGAACTG TTATGAGGAT TAAACGAGTT ACAGTGTCCA TCTTAAAAAG ATAATTCTGA 001120
001121 AAAAAATCTC ATAGGTTCAC TTTGCCTTGT CAAGAATATG ATTACCATTA ACTTCTGTAG ATAGGAAAAA AATGTGCTGA 001200
001201 GCTCCAAAAC TGACAGACAT TTTGCTAAAA CAATATCAAA TCTCATTAAA ATGATGACAG TTATTTCAAT AGTTGACAGT 001280
001281 AGCTATCCCA ATACAACCTA ACAAGGCATT TTCTCTTCAG AATCACTCGA TCATATGGCC ATTTCCCTAA GCTTTTATAG 001360
001361 CTATTGCCCA GTGTACACTG AAGACAACAG CTAACGAACA ACATACGTGT GATAATTTAT GTAGTTGAAC CTCTAAGGCA 001440
001441 AAAAAAAAAA AAAAAAGGAA AAATTAGTGA AAATCATTCA AACATTATGC TCACCAGGTA GACTGCCATC ATAGAAGTCC 001520
001521 TAATGCTACT GCTAAAAACT AGTAAATACC AGTAAACTGT GAAGACAGAA GTAACTCCTG TGATCTATAT GTTTGTGCAG 001600
001601 ATGGTGGAGC TTTTCTGCTC CTAAAGCCTG AGAAATGCAA ATGTGGCTTC GTTAATGCAA ATGCTTCCTA CGCCAGACTT 001680
001681 TATGAAACTC CTCCTAAAGT TGAATTCTTA TCCAAGTGGA CATATGTTAG GGTGCCATTG TAATTCAGGT AGAGTGTCAG 001760
001761 AGTGGTGGCT GGCACCAACG GTAGATGTTC TCAACATTAG CGTTATTCAG GTAAGACTAC AACAATGATG AACATGTCAA 001840
001841 AACTTTCCTT TAAAAGGAAC AATCAGAAAA ACTCTTTAAC AAATGTTTTT CTTTCCGTAG TATTTTAATT AAAATTTTTA 001920
001921 AAATTTTAAA ATTTACTAAA TTTATGAACG TTTTTATCCC ACTTGAGATG AATACTTATT TATAGTCCCT GTCCCATGAA 002000
002001 GCTTCTGTGG ATTTGCTTTG TTTGTCATTT GTGGTATGTT TGATAACAAA AATATTAGTG GCACAAAAGC AGTTATATTG 002080
002081 AATGCTTTTG TTTTAGAGAA AATTTCACTC TGTACTAGAA AATGTAGATG ATGTGAGTCA AAGTTCATTA ATATTTACCT 002160
002161 GAAAATTTGT GTATAAAGGT AACCTTGGGG CAGTTTATTT TGCTTAGACC CCTCAGCTTC TTGATAGAGT GAGGTGAGGG 002240
002241 CATATGTAAG TCAGTAAACT ATTCTGTTAG TAAAGTCAAA GGCGTAATCT AAATTAATTA TGCTTTTAAC TAACACAGAA 002320
002321 GAAATCATGT GACCTCATTC TCAAAGCTCG TAACATCCAC CTGGCCAATC TTAAGATGTG GATAGAGTTC TTTTTTTTCT 002400
002401 TTTTTCAATT TTTACAATAA TTTTTGACAC ATTGAAGCTG TGCATGTTTA TGGGGGCACA ATTTGATGTT TCAATACATG 002480
002481 TATATGTTGT GTAATGATCA AATCGGAGTA CTTAGCATAT CTATCATCTC GTGCATTTAT CATTTCTTTG TGGCGAGAAC 002560
002561 ATTTAAAAAT CCTATTTTCT AGCTATTTTG TAATATACAC TACCTTACTG TTGCGAACCA TAGTCACCCT ACTGTGCAAT 002640
002641 AGAACACCTG AACTTATTCC TCCTATCTAG TTGTAACTTT GTACCCATTG ACCCCCCTTC CCTTCCTTCC ACTCTCCCCT 002720
002721 CCCCAGTCTC TGGTAACCAC TGTTCTGTTC CCTATGAGAT AAAACTTTTT TTGTCTTCCA T
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Predicted Small Protein

Name NONHSAT098640_smProtein_701:835
Length 45
Molecular weight 4889.8266
Aromaticity 0.0681818181818
Instability index 57.2636363636
Isoelectric point 10.7631225586
Runs 7
Runs residual 0.00401069518717
Runs probability 0.0438463673759
Amino acid sequence MTWAILWVVSELLLRVHTRSRSGHLKVCGISPSLTLSLAPTFVI
Secondary structure LLLHHHHHHHHHHHHHHHHLLLLLEEEEEELLLLLLLLLLLEEL
PRMN -
PiMo -