NONHSAT136413
Revision as of 12:57, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT136413 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
807 nt |
Genomic location |
chrX-:18257505..18259345 |
Exon number |
2 |
Exons |
18257505..18258098,18259133..18259345 |
Genome context |
|
Sequence |
000001 ATAATTCTCA GGTGTACTGT TAACATTTTA ATTTAAAAGT ATTTCTCTTA GCAGTTTTTG TTTTGTAGAC AGTTCCCATA 000080
000081 AAAATATTTT ATCAGAATTG CAGAACTGTA GTAACAGTTC AGTCAACTTT GTTTTTTTCC TGGAGTCACC AACCAGCTTT 000160 000161 GGGAGACACA GCCGCCACTC CCCCAGTCTA CTTCTTTAAA AAGCATTTAA CAGatggagt ttcactcttg ttgcccaggc 000240 000241 tggagtgcaa tagctcgatc tcggctcact gcaacctcgc ctccctggtt caagcaattc tcctgcctca gcgattacag 000320 000321 gaatgcacca ccacgcccag ctaattttgt agagatgggg tttctccatg ttggtcaggc tggtctcaaa ctcctgacct 000400 000401 caggtgatcc gcccacctcg gccttgcaaa atgctgggat tacaggcatg agccaccatg cccagccATG TTTGGGGCTT 000480 000481 TATTTTATAA GTTAGAACTT TGAAGAGGAA ATGGTGCTAT ATGTTTATTG TTATTACTTT GTGTAACTTT GATGTAATGT 000560 000561 TTATAAGCTA TGAGAATCAG TTATAAAAGT ATTAGCCATT TGTTGTAAAT GCCAATAAAA TATTCACCAG GGGCAAGAAT 000640 000641 GTACATTTTC TTTTTAGAAA ACCAAATGTA CTTTAGACAT GAATGCAACT ATTTAAAGAA TAGCTTCATT TATGTTATTC 000720 000721 CTTACATGTC ATAAGATTCT TACTTAAACT TGGTCTTCTT TCAAGTTGTT TGTATGAAGA TGCTGTACCC ACTTGAACAG 000800 000801 TCCTCAG |
Predicted Small Protein
Name | NONHSAT136413_smProtein_608:733 |
Length | 42 |
Molecular weight | 5106.9802 |
Aromaticity | 0.243902439024 |
Instability index | 70.8365853659 |
Isoelectric point | 8.88958740234 |
Runs | 6 |
Runs residual | 0.0296274128385 |
Runs probability | 0.0380821998468 |
Amino acid sequence | MPIKYSPGARMYIFFLENQMYFRHECNYLKNSFIYVIPYMS |
Secondary structure | LLLLLLLLLEEEHHHHHHHHHHHHHHHHHHLLEEEEEELLL |
PRMN | - |
PiMo | - |