NONHSAT137376

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT137376

Source

NONCODE4.0

Same with

,

Classification

sense

Length

4098 nt

Genomic location

chrX+:67753022..67757119

Exon number

1

Exons

67753022..67757119

Genome context

Sequence
000001 TCAAGCTAAT TAGCTCCCCT TTAGATAAGT ACATGTTGCA CATGTGCACC TACTTGTAAT CTCAGATATT TATGCACACA 000080
000081 AGTGTGAAGG TTTTTCAGGG AGCAGAGCAT CTGGGACAGG CTGATTCTGA GCTAAACAGG GCTCCTTTAA GGCAATATGA 000160
000161 ACTGTTGCCT TCTATAAATT GCACATTGAG GAACTCTAAT AGACAAAGAT TAGGTGTCAG GCAGAAAACA CTCATTGTAA 000240
000241 ATATACTATT AGTTGATAAA CATAGGACTT TCTTATTCCC CAGTTTTTCT TTATCATATA ATTTAAATAT TTATTCATTT 000320
000321 TGTATTTAAA GACTACCTAC ACATAGATAT ATGATTCCAA AGTCATACTT TCTCCATCCC CACATTAGCC AAGTGAATAC 000400
000401 AGGGCCAAAT GGGTTCTTGG AATGATAATA ACAAAGCATT ACAAAGTGGG TCCCCTTGGT TCCAGCCTTG TCCAGAGTTT 000480
000481 TTGGTTATAT ATTTCTATTT ATTACAATTT ACCTTTTAAA TTGTAAAATA AACCTTTGTG TGGACAGAGC CAATGTTTCA 000560
000561 ATCTTGAATG AGTAAAGAAA ATACTTTGGA ACTGATCCTC ATTTTGAAAT TGGTTCTAAA TTATTATCCA TTTCCAATGT 000640
000641 CTGAAATTCT CTTACTTCCT GCTAAAACTC TCTTTCTGCC AAAGTTGTTT CGTAATCTGT CTCAATGACT ATAATGTAAA 000720
000721 ATTAAAGAAG TAACCATGCT TCTCAAGGGG GAATTAAAAG TGTTTATTGA ATTTTACTCA GGCTAATTGT TTGGTCAGAA 000800
000801 ATTCCTAAGG CCACAGCTTT GGGGGGTTCG TGTAGATGTA CATGGTGGGT GGGTTATAAA TATTGGGACT TAAGGCAGCT 000880
000881 TGTTCTATGT ATTTATCTTT GCTCTTGGGT GACTTAGGGA ATGATTTTAT TTGATTTAAC CTTCTTTCTG TTTGCCCCGA 000960
000961 GAATACTCGC CAGTGGCGCT TGCAGTTGTA GCATTTACCC CAAGATAACT TTGCCTACGA AATATTTCGC TTTTATTATT 001040
001041 TTCACATCAT TCTAGTATAT GGACTTTGGA AACAAAAGAC ATTGTTCTAT TTATAGCATT CTTTTTTTTT TTTAGTAGCG 001120
001121 GTATTTCCAT TTACAAAATA TAGTAACTCT TGATTACTGA AAATGTCAAA TCCTAGAAAA CGTAGCATGC CTATACATGA 001200
001201 TGTTAACATC ATTCTCGAAC AGTTGTTGGC CGAAGATTCA TTTGATGAAT CCAATTTTTT TGAAATAGAC AATTCTGATG 001280
001281 TTCTCTTTAG AAATAACTCA GTTTTTATCT TTTTTCACAT TGAAAATCAG TTAGATTTGC TTAAGCCTCA AAGAGAATGT 001360
001361 TTATGTAAAT TAGCGCTGGC AATTTTTTTT TTTCTAAACA GGAAAAGGGT TAAATGAAGG TTGATAAAAT GGATGTTCAA 001440
001441 TTGTCTTTCT GAAAGTGAGT GGCTTGAAGG GATGAATAAA TATTTTCTTA ATATATTCAA AAAAGTGCAT TGCTTTCTGT 001520
001521 GATGGAAGTT AAGACCTAAA TGTCTGGAAG TTGTAACCCT CAACACAGCT TTTCCTGATT TGCTGCAAAG GCACATAGCT 001600
001601 GATTATAGAA GTGAAGACGG CAAGGACGGG GACTCCAACA AAGGAAACCC TGTTGCAGGA TTTGGGAACT TTCATGCTTC 001680
001681 AGATGAAATT CAGGCATGTG AGCATCACTG CAGAATGTGG TGCATCATTG CCATCATGAG TAATCACTTG CTGCTCCTAC 001760
001761 TTCTGAGACC AAGACTCTTT TGTCATATTC TTTAGCAATA GGACGGGTAA AGACTGGATT TAATTGCTGT TCAGAGTATA 001840
001841 AAAACTCAAT TGATTCCAAC ATATCTGAAT GTGCAGTAAA GTCTTAAAAG TCAACCGTTA ATCATTAAGT CTTTTGCCTC 001920
001921 TAAAGTCTTT TGCCTCTGAA GAGGTTTATT ACATGAGTTG ATTTTCATAT TTTCATTTTG GTGGGGTTTT CCTGTTGTTG 002000
002001 GGCAAGGTGG GGTCACAGGA CATGGGACTA GTAAGCATTT TACTGTTTAC TATATTTGTC TTTTTATAAA CAGTATCTCC 002080
002081 CAAAATGTGA TTAGAAGGCT ACCAAGCCTG TATTTGGACA TTTAATTGTG TGCTTTATAT AATGTAACTA CTAACAGTAT 002160
002161 TTGGACTGCC TGTTCATTCC TGGAGACAAA AATGAAAATC TGTCAGTTCA AGTTCTTGGG TAACATCAAG TCATTAGAAT 002240
002241 TTATCTAAAG CTTATCATGA TTTGATAAGA CATCCATTGC ATGCAGCTGT TTTAGCTCAG TGCAAAACAC TGAAATTGTG 002320
002321 ATTCTTAGAC TGTTTCTGAG ACATTTGGAT GGAAATAAAT GTATAAATGT TAATTCATGT ATATAAATTA GAAACACTTT 002400
002401 TCTAGATTCT GTAGGCTTTT GTTAAAAATA GAGAATTTCT TGGGGTTTAC TTAGGCCACA GAATGGCCAA ATAATAATAA 002480
002481 TGACAATGAT ATTACTAATA ATAATAGCTA ACCTTTATTT GGCACTTACT GTGTGCCAGG CACTATTCTA TTTTTTTAAG 002560
002561 AATTTTTAAA ATAACAGCTT TATTGAAATA CACTTTACCA TAAACTTCAC CTTTTTATTT TTTATTTTTA TGAGACAGGG 002640
002641 ACTCACCCAG GCTGGAGTGC AGTGGAGCAG TCATGGCACA CTGTAGCCTC GACCTCCCTG GGCTCAAGCA ATCCTCCCAC 002720
002721 TTCAGTGTCC CGAGTAGTTG GGACTACAGG CATGCGTCAC TACACCTAAT TGGCTAATTT TTGTAGTTTT TGTAGAGATA 002800
002801 GGGTTTCGCC ATGTTGCCTA GGCTGGTCTT GAATTCCTGG GCTCAAGCGA TCCACCTGCT TTGGCCTCCC AAAACAGTGG 002880
002881 GATTGCAGGC GTGAGCCACC ATGCCTGGCT GAAATTCACC TTTTAAGATG TACAATTCAG TGGTTTTTAG TATATTCACA 002960
002961 CACAAAATTG CACAACTATC ACTAACATCT AATTTTAGAT CATTTTGTAA CTTCACCAAG AAACCCCAGG TCTGTCAGCA 003040
003041 GTCAGTTCCA TTCCCCCTTC ATCCCAGCCT CTGGCAACCA CTAATCTGCT TTCTGTCACT ATTGATTTGG CCAGACACTA 003120
003121 TTCTTCTGTG CTTCTCATGC ATCTCCTGTA ATACCAGTGC TACAATTCTC ATTTTATGTG GAAAATTGAG GCACTGAGAG 003200
003201 GTTAAGTAAA TTGCCCACGG TCACACAGTA ATTTGATTTA CAACAGTAAT AACACATTAG ATGAGAACAC AGTAGGACAC 003280
003281 AATTTTGAAT TCCATTTTTA TGTACCTGAA ATGAATACAC CCCTCCCCCA AGGTATTTTC CCTATTGTTA GCCTTTGTAC 003360
003361 CCTAGGTACA AATATAGGTA TTTTCCCTAT TGTGTTATGT ACCTGAAATG AATACACCCT TCCCCCAAGG TATTTTCCCT 003440
003441 ATTGTTAGCC TTTGTACCCT AGAACTGACT GGATGTAGAT AACATTTGTT TTCAGAGTAA TGGAACACTG TATCAGCAGC 003520
003521 ATCTGAGAAC ATAAGAACAG TTGGACATTG GAAAGAGGTT TGTTGCCCTC ATCCCTCCTT GAACCTCTTT TCTCTCCCGC 003600
003601 TTCCACCACC ACCACACATA TATACCCCTT TTTCTCAGTC TTAAGCATCA AACAATTTCT GCCTCTTTCT TTTTAATTCT 003680
003681 CCCAGAGGGA TGGTTAATGC ATCACAATTT AACTTGTCTA TTCAGGTATT AATAGTCAAG GGATGCATCT GTTTGCTTAT 003760
003761 AGTACCAGTT ATATTCCTAG GACCTTAGAG AGCAGTAGTG TGAGAATAGA ATGCCTTTCT ATTTGGGTTA AACTATGTGG 003840
003841 GAGGAAAAAG TAACAGAGTA AAGGCTTTGC CTTAATGAAG TCAAGTGTTC TGCCTGGTGG GAAGTGGCCA CACGCTGCAC 003920
003921 TGCGCTGCTC TTGTTTACTC TGTTCTTTCA GAGCCTTTGT ACTTTGCCAT CACTGCTAGT AATTTCTTGG TCCTTTTCAA 004000
004001 TACTCCATTT TAATCTTGAT TTTTTTCTAT AAATAATAAA TCTGTGAAAA ATCTGTAAAA AGATTTGTGA CTATTAAATG 004080
004081 TGCAACTAAA AACACTGG
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Predicted Small Protein

Name NONHSAT137376_smProtein_2927:3196
Length 90
Molecular weight 10152.0229
Aromaticity 0.123595505618
Instability index 48.4438202247
Isoelectric point 9.01116943359
Runs 14
Runs residual 0.0141000220313
Runs probability 0.0435561612033
Amino acid sequence MYNSVVFSIFTHKIAQLSLTSNFRSFCNFTKKPQVCQQSVPFPLHPSLWQPLICFLSLLI
WPDTILLCFSCISCNTSATILILCGKLRH
Secondary structure LLLEEEEEHHHHHHHHHHHHHLLHHHHHLLLLLLEEELLLLLLLLLLHHHHHHHHHHHHL
LLLEEEEEEEEEELLLHHHHHHHHHHLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHH
HHHHHHHHHHHHHHLLLLLLLLLLLLLLL
PiMo oooooooooooooooooooooooooooooooooooooooooooooooooTTTTTTTTTTT
TTTTTTTTTTTTTTiiiiiiiiiiiiiii