NONHSAT124782

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT124782

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

919 nt

Genomic location

chr8-:6526843..6527761

Exon number

1

Exons

6526843..6527761

Genome context

Sequence
000001 GCAGCAGTCT GTCAACAACT ATGGCATCCA GCTGGTCAGA AAGACTAGAG GATTTGACAT TTTGCGGCTG TTCTCTAGAA 000080
000081 CCAAAGAAAT GAGAACCTCT TGGTAAAATC CGCTGGTCCA GGAGTTATTA TCTCCTGGAT TATCTGCCAA AGAAATTATC 000160
000161 TGCCAAAATT ACAATGTAAA ACTGAAGAAG ACAACCGATA ACTCAGTTAA AATTTTGGAA AAATACAAAG AAACTGTGAC 000240
000241 TGGGGAGAAA TGGTGAGGGA AATTTTCTCG TTGAATTAGA GGATCAGGAG GGCTAAAGGG AGCCCTCATG CTATCAACCA 000320
000321 AAATCTCTGT TAAATTCCAA ACATAAAATA TCTTTTCTCA CTGTTAAAAT GTCTAAGCAG TCTCCACTAG CAGCCCCCGT 000400
000401 CCTGGACACA GGAGCACTGC CCTGCCTGGC CGTCAGGTGC TCCCATAAGC ATCATTCAGA CAGCGAGGGG GGCAGTGGAG 000480
000481 GATTCGGGGG CAGGAGATGG GGTGGTGGAG AGAAGGATGT AACCATCAAA AGTCCATTTT CCCTGCTGAA GCTACCCATG 000560
000561 GAACTTTTAA ATTGGGTGCA GATTTAAAAA TTAATACAAA ATATTTGAAT AATCGGGGAT GTATCAAATG TTCATAAATT 000640
000641 ACAGCTCCAA CTAGGAATGC CTAAGGAACT GTTCCTTCCG TTTAATTGTC CTCTTTGTCT ATCAAAAAGA CAGCCACTCG 000720
000721 CGTGCCTCTT CTAAACAGTC AAATACCATC CTAAGCTCTC ATGGAAAATC TCAAGAGGCT TATTGGTTGA CTAATTCTAA 000800
000801 ACCTCTGTTT GCTCAAAGGA CAGTGTCAGC TACAATTTTT CATTTGCTTT TGTATTCCAT TTATTTTTCT TTACAGCTTT 000880
000881 GGGAGATGTG TATTATACTT CTTTTCTTTT AATGATTAT
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Predicted Small Protein

Name NONHSAT124782_smProtein_368:586
Length 73
Molecular weight 7657.7466
Aromaticity 0.0555555555556
Instability index 70.3611111111
Isoelectric point 8.77044677734
Runs 9
Runs residual 0.0159164639092
Runs probability 0.0407956976585
Amino acid sequence MSKQSPLAAPVLDTGALPCLAVRCSHKHHSDSEGGSGGFGGRRWGGGEKDVTIKSPFSLL
KLPMELLNWVQI
Secondary structure LLLLLLLLLLLLLLLLLLEEEEEELLLLLLLLLLLLLLLLLLLLLLLLLEEEEELLHHHL
LLLHHHHHHHLL
PRMN -
PiMo -