NONHSAT124782
Revision as of 08:56, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT124782 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
919 nt |
Genomic location |
chr8-:6526843..6527761 |
Exon number |
1 |
Exons |
6526843..6527761 |
Genome context |
|
Sequence |
000001 GCAGCAGTCT GTCAACAACT ATGGCATCCA GCTGGTCAGA AAGACTAGAG GATTTGACAT TTTGCGGCTG TTCTCTAGAA 000080
000081 CCAAAGAAAT GAGAACCTCT TGGTAAAATC CGCTGGTCCA GGAGTTATTA TCTCCTGGAT TATCTGCCAA AGAAATTATC 000160 000161 TGCCAAAATT ACAATGTAAA ACTGAAGAAG ACAACCGATA ACTCAGTTAA AATTTTGGAA AAATACAAAG AAACTGTGAC 000240 000241 TGGGGAGAAA TGGTGAGGGA AATTTTCTCG TTGAATTAGA GGATCAGGAG GGCTAAAGGG AGCCCTCATG CTATCAACCA 000320 000321 AAATCTCTGT TAAATTCCAA ACATAAAATA TCTTTTCTCA CTGTTAAAAT GTCTAAGCAG TCTCCACTAG CAGCCCCCGT 000400 000401 CCTGGACACA GGAGCACTGC CCTGCCTGGC CGTCAGGTGC TCCCATAAGC ATCATTCAGA CAGCGAGGGG GGCAGTGGAG 000480 000481 GATTCGGGGG CAGGAGATGG GGTGGTGGAG AGAAGGATGT AACCATCAAA AGTCCATTTT CCCTGCTGAA GCTACCCATG 000560 000561 GAACTTTTAA ATTGGGTGCA GATTTAAAAA TTAATACAAA ATATTTGAAT AATCGGGGAT GTATCAAATG TTCATAAATT 000640 000641 ACAGCTCCAA CTAGGAATGC CTAAGGAACT GTTCCTTCCG TTTAATTGTC CTCTTTGTCT ATCAAAAAGA CAGCCACTCG 000720 000721 CGTGCCTCTT CTAAACAGTC AAATACCATC CTAAGCTCTC ATGGAAAATC TCAAGAGGCT TATTGGTTGA CTAATTCTAA 000800 000801 ACCTCTGTTT GCTCAAAGGA CAGTGTCAGC TACAATTTTT CATTTGCTTT TGTATTCCAT TTATTTTTCT TTACAGCTTT 000880 000881 GGGAGATGTG TATTATACTT CTTTTCTTTT AATGATTAT |
Predicted Small Protein
Name | NONHSAT124782_smProtein_368:586 |
Length | 73 |
Molecular weight | 7657.7466 |
Aromaticity | 0.0555555555556 |
Instability index | 70.3611111111 |
Isoelectric point | 8.77044677734 |
Runs | 9 |
Runs residual | 0.0159164639092 |
Runs probability | 0.0407956976585 |
Amino acid sequence | MSKQSPLAAPVLDTGALPCLAVRCSHKHHSDSEGGSGGFGGRRWGGGEKDVTIKSPFSLL KLPMELLNWVQI |
Secondary structure | LLLLLLLLLLLLLLLLLLEEEEEELLLLLLLLLLLLLLLLLLLLLLLLLEEEEELLHHHL LLLHHHHHHHLL |
PRMN | - |
PiMo | - |