NONHSAT127805

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT127805

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1185 nt

Genomic location

chr8+:95908036..95919169

Exon number

3

Exons

95908036..95908155,95911394..95912011,95918723..95919169

Genome context

Sequence
000001 CCACGCGCCT GGCCAAGTGC GGCTCTGCTC TCCCCAGTCC CGGTCCGCGA CCACCCGGAG CCCGCTCCGC CGGCCTTGCG 000080
000081 CGGCGCGCCC AGGGAAGGCA TTTCCAGCCC GCCCACCCAG TGGGATTACA GGCATGAGCC ACTGCACCTG GCCAATTTTT 000160
000161 TAAATTAGAA TCAGGTGAGA TGCAGTTTTA AAAACAATTT TATTGTTAAA CAAATACATT TTACTGTAAG ATAGTTTTGA 000240
000241 CTTCACATTC TACTTTGAAG CGTCATTGAG ACCTCTAGAT GTCCACAGAA CACACTTTGA GAACTGCATA CATAGTTGCC 000320
000321 CAAACCAGAA TCCTGGGAGT GAACTTAGTC ATTCCTTTTT TCTTCTTTTC TGAGCTTCAT AATCATAGTT AATATTTCCT 000400
000401 GGGTAAGATA ATGTGCTAGG CTGTACCCCA AGCCTTCACA TACTATTAAC TCCTTCAATC TTCCACCAAC ACTATAAGAC 000480
000481 AGGTGCTAAT GACTGTCATT CCTGGTTTAT AAATGAGGAA GCTGAGGCAC AAGTGTAGTT TGCCTAAGAT CCACAGTAGA 000560
000561 GTCTGACTCC AGCTCACCTG TGCTGTGCTG CCTCCATTTA TCACCAAATT CCTTTCTCTT CTGTTCCCAA GTCATTTCCA 000640
000641 CATTCATGCT TTATTTCCCT CTGCCTTAGT TCAGGACACC ATTCTCTCTT CAGTGCAATA CTCTTCTAAC TGGTTTTCCT 000720
000721 GACATGCATT GCCTCTTGCC TTGGCAACAG GGATTGTTTC ATGATAGGAC AAATGTTCCA AGCAGGGCCA AAGTCCTTCC 000800
000801 CTCCACGTGA GCTAGCCAAG AAGCCTGCCT CTTGCCTCTA GGGTCACTGT GTCAAAGAAT GTTCACCTGG GGGACCTCCC 000880
000881 ATCTGCAGCA CTAAAGGACA TGCTGACACA GAGCAGAGGG AGTGTCCTGG TTTAAGTCGT GGATCCACCT TGGTGGTTCC 000960
000961 TAGTAATGAA AGCCAGTCCA TCACATTTTA GCTTAAGATT ATTTTGAGTC AGTTTTATCA TGTGCAACTG AGAGGATCAT 001040
001041 GACAAATACA CTTGACCTTG TTCTGCCATT GCCCCTGTGC TTTATCTATT TGTATACATT ACACTATAGG GTAGTTGTAA 001120
001121 TTGCCTGTTT ATTTGTCTGT GTCTCCCACT AGAAGTTCTT AATTGCACCG TCAACATTAT GTATC
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Predicted Small Protein

Name NONHSAT127805_smProtein_278:391
Length 38
Molecular weight 4290.8974
Aromaticity 0.135135135135
Instability index 46.8837837838
Isoelectric point 6.81207275391
Runs 6
Runs residual 0.017604760724
Runs probability 0.0374344933169
Amino acid sequence MSTEHTLRTAYIVAQTRILGVNLVIPFFFFSELHNHS
Secondary structure LLLLLHHHHHHHHHHHHHHLLLEEEEEEEEHHHLLLL
PRMN LLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLL
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