NONHSAT131667
Revision as of 11:41, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT131667 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
828 nt |
Genomic location |
chr9-:69256455..69262541 |
Exon number |
4 |
Exons |
69256455..69256889,69259222..69259308,69261239..69261336,69262334..69262541 |
Genome context |
|
Sequence |
000001 ACGGCGTGTT GGTCCCAGCG GTTCAGCTGA GGTAGGGACG TGCTGTAGGC CGGAATGTTA CCGGCTGTTG GATCTGTGGA 000080
000081 TGAGGAAGAG GATCCTGCGG AGGAGGATTG TCCTGAATTG GTTCCCATTG AGACGACGCA AAGCGAGGAG GAGGAAAAGT 000160 000161 CTGGCCTCGG CGCCAAGATC CCAGTCACAA TTATCACCGG GTATTTAGTT ATTCAGAGGC TGCTCTACTG AGAAGATGAA 000240 000241 CAAATTTCTT GTCCAAAACA ATGTATTTCA AACGTGCCCC TCGGGCCTTT CCCGTGTTGC TCACTGGTGC TGGGAAGACA 000320 000321 ACACTTCTGA ACTATATTTT GACAGAGCAA CATAGTAAAA GAGTAGCGGT CATTTTAAAT GAATCTGGGG AAGGAAGTGC 000400 000401 GCTGGAGAAA TCCTTAGCTG TCAGCCAAGG TGGAGAGCTC TATGAAGAGT GGCTGGAACT TAGAAACGGT TGCCTCTGCT 000480 000481 GTTCAGTGAA GTGAGGAATG TGTTTACTGT GTACATGGTT TACTAGAAAT GTTTATTGAT TATATTTCCA GCTTTAATTT 000560 000561 TCTTGAGTAA TTTAACTGAA TTTACACAGT TTGCTTCATT GTATTTTCAA ACAAATAGAA AATAAACTTA TTAGGAAGCA 000640 000641 TTTTCTTAAA GTGTTTCTTG CTGTCTTTTC TATCTGCTCT AATGTTTTGG TCCTTTTATT GAGTTTTTAT TGCTTTTGAT 000720 000721 GTCAGGGCTT ATTTAATCTC TAGTGCATGA AAGTCTCATA TGTAAAAAAT GATTATTCTG AATTTAATCT GTCATTGGTC 000800 000801 ATACTTCTAA GTGTTCAACC TTATAAAA |
Predicted Small Protein
Name | NONHSAT131667_smProtein_260:493 |
Length | 78 |
Molecular weight | 8489.7366 |
Aromaticity | 0.0779220779221 |
Instability index | 44.5142857143 |
Isoelectric point | 7.70806884766 |
Runs | 13 |
Runs residual | 0.0327498588368 |
Runs probability | 0.0431223078282 |
Amino acid sequence | MYFKRAPRAFPVLLTGAGKTTLLNYILTEQHSKRVAVILNESGEGSALEKSLAVSQGGEL YEEWLELRNGCLCCSVK |
Secondary structure | LLLLLLLLLLLEEELLLLHHHHHHHHHHHHHLLLEEEEELLLLLLHHHHHHHHHHLLLHH HHHHHHHHLLEEEEEEL |
PRMN | - |
PiMo | - |