ENST00000417473.2

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	ENST00000417473.2
Source	Gencode19
Same with	lnc-GREB1-4:1,NONHSAT069164
Classification	intergenic
Length	1330 nt
Genomic location	chr2+:11534107..11543203
Exon number	3
Exons	11534107..11534297,11540498..11540583,11542151..11543203
Genome context
Sequence	000001 CGGAAGAGTG GGACGTTATG GAACCTTCTC AGCTTATTCA GAGAGGCTTC TTCTTCCTAT TTAGTCTCCC TCTGGCTTTC 000080 000081 CCTGCTGGGA TCTGGGTGGT AGAAGCAGCA GGGGGATCAA CGAACAGGCT GAGCGCCAAG AAGCCTGAAG ATTCCAGAAT 000160 000161 CTAGCGGGAA AAGCATTCAG AGTCAGAATG AGCCACTTCC AGCATCGATG GTGTCAGGTC AGGTCCTCTG GGTAGAAGAA 000240 000241 ATGGAGTCAG TTAGGAGTGC TGGAGACTGA GTAAGAGGTG GCAGCTGAGG CTTACTACCC CAGGAAAGGG ATGCCACCAG 000320 000321 AGAAGGCAGA CAACCAAGAT GGCGACTCTC AATTTTTGAG CTCCTAATTT TCTCATGTCA GACATAAGAA AAAAAAATAT 000400 000401 TTTTTAAAGA AAAAGCTTTA GGTTGCAAAA ATCTAGGCCT TTCAACTTTA AAATCCTATT CTTGCAAGCC TTGGAGAATA 000480 000481 AAGCTTATGC ATAAACAGTA GATTTGGAAA CAGAAATATG CCTAATTACC CAGAGCCATT CTTTCAATAC GCCAGTGATT 000560 000561 GTTTAAAGAT TCTATAGGCT GGAGTCAATG GCAGGAGGCG GGTGGGAAAA GAGTCAAGAG GGAGGAGAGA AGAAGCAAGA 000640 000641 GGGTTGGGTA GATATTGTCA CATGACCCTG AGAGGAGGAT TCTGGGTCAA ACCCCTAGGG GGTTGTGTGT AATGGAGACT 000720 000721 CCAGATCCAT TTGGGAATCT GGCTCCAAAG AAGACTTCAC CTTGCCTTCT GAGTGGAGCC CTGAAGTGGC AAGACTCATA 000800 000801 GAATTCCCCC ACGGGTCCAC ACAAGAGAGA ATGAATAGAG AAGGCTGCGT GCTGGCTGGA CCAAGGCAGC CTCGGGTGAC 000880 000881 ACCACCACCA CCACCGCCGC TGCCGCCATC GCCATCACCA CTGCCGCTGC CATCACCGCC ACCACCACCA CCATCACCAC 000960 000961 CACCATCACC ACATTATGGA CAATAGCCCA ATGTTTCCTG AGTTCCCTAG AGGGTTGAAA GAGAATAGGA CCTAGAGAGA 001040 001041 TCACATAGTT GGGACAGGCA CTCATTAATT TGATCCAATG ACAAGAGACC AGATGGGAAG AAGGATGCCT TGAGAGATGT 001120 001121 CAGTGTGCAC CCATGGATAG AAGCAGCTGG TGACTGGGTA CTTGGGAAGC CACATGGACA CACACAAAGC TCCTGGAAGA 001200 001201 CGTTTTCAAG GAGTTGGGCT GTGCTGGGAT CCAGAACTGG CTGAAGAAAC CATGAGCTGA CATAAAATTT CTGCCACCTA 001280 001281 GCAGAATGGA GGCTCCATTT GGAAATTAAA TTATATACTT AAAAAAACTA

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Annotation (From lncRNAdb)

[ENST00000417473.2]

Section	Description
ID	LINC00570
Characteristics	Multiple 2-4 exon isoforms with variation in splicing and TSSs. Isoforms between 380 nt and 1.3kb. Intergenic between ROCK2 and E2F6. In-vitro translation showed no sign of protein product.
Expression	Expressed in HeLa cells.
Function	LINC00570 expression appears to stimulate ROCK2 gene expression (in HeLa cells).

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