NONHSAT119197

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT119197

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

478 nt

Genomic location

chr7-:11046026..11046503

Exon number

1

Exons

11046026..11046503

Genome context

Sequence
000001 tttcacaaga cagTGCCGAA AGTGAAGGAA GCTCCTGTCC CTCCTAAAGC TGAAGCCAAA CCGAAGGCTT TCAAGGCCAA 000080
000081 GAAGGCAGTG TTGAAAGGTG TCCACAGCCA CCAAAAAAGA AGATCCGCAT GTCACCCACC TTCCAGCAGC CCAAGACACT 000160
000161 GAGACTCTGG AGGCAGCCCA GATATCCTCG GAAGAGCTCC CCCAGGAGAA ACAAGCTTGA CTACTATACC ATCATCAAGT 000240
000241 TTCTGCTGAC CACTGAGTCT GCCATGAAGA AGATAGAAGA CAACAACATG CTTGTGTTCA CTGAGGAAGT TAAAGCCAAC 000320
000321 AAGCACCAGA TCAAACAGGC TGTGAAGGAG CTCTGTGACA TTGATGTGGC CAAGGTGTCA ACACCCTAAT TCGGCCTGAT 000400
000401 GGAGAAAAGA AGGCATATGT TCGACTGGCT CCTGATTACA ATGCTTTGAA TCTTGCCAAC AAAATTGGGA TCATCTAA
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Predicted Small Protein

Name NONHSAT119197_smProtein_128:388
Length 87
Molecular weight 10182.7847
Aromaticity 0.0813953488372
Instability index 72.0558139535
Isoelectric point 9.88409423828
Runs 14
Runs residual 0.0231690385283
Runs probability 0.0458841194135
Amino acid sequence MSPTFQQPKTLRLWRQPRYPRKSSPRRNKLDYYTIIKFLLTTESAMKKIEDNNMLVFTEE
VKANKHQIKQAVKELCDIDVAKVSTP
Secondary structure LLLLLLLLLEEEELLLLLLLLLLLLLLLLLLHHHHHHHHHLLHHHHHHHHLLLLEEEEEH
HHHLHHHHHHHHHHHHLLLLEEELLL
PRMN -
PiMo -