NONHSAT120275

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT120275

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1585 nt

Genomic location

chr7+:42906250..42908895

Exon number

2

Exons

42906250..42907591,42908653..42908895

Genome context

Sequence
000001 GAATACTAAT ACCAAAGGAC TGAGTCTCTT TAAATTTGAC CAACTGACTT AGCAGGCAGC TGGTGCCTTG GTTCCTTTCT 000080
000081 ATCCCTCATG CTTAAGATAA CTTGACAAGA CACTGAGGGA TATTTTGAAC CTTTCAGGCC TAAAAGCTGT GATTTGGATG 000160
000161 GAATTAATAA AATGGCAAGG TAATTGCAAT CCTTTTCTCT CTTTATTGGC TTGTATTTTG CTATGTTGAT TCTGAAGTGG 000240
000241 ATAACTTGTT GTTCTATACT TTTTAACTTA AGAAAATGTG TTCAGTATGA TTTTGTGTCT TCCTTAATGA AAAGTGTTTA 000320
000321 TTTTCCATTG CTGGTTTGCC GCAGACCCAT TTCTGGCTAA GCATAGAACT CTTCAGTCAT CTAAACCACT GTCTGAACAT 000400
000401 ATTTGAGCAT GGAAAAGTAA AAGTTTTAGG AATTTATCTG TGTTGGGTTG ACTATTATGT ATTTCTGTTG ATCTCCAGAC 000480
000481 ATAGAAAGGA TCATTTTCCT TCCTAGGACA CATTCAAATA CAAATGCTGG TTTTATGGAA AGATAGTGTC TGGATTTAAT 000560
000561 GTATCAGATG CCTTAAGATA TGTGAATCTG GTAAATTCCA GGCCTGATTA TCTGATCATT TGTGTATTAA CATTTGGAGG 000640
000641 CCAACAGCAA TTCTCATAGA AGGGAATGGG AGAGCTTACA TAAACTGAAT CACTGTGATC TAGGCATGAT TTTTATGTGG 000720
000721 AAATAAATTT TTCCTAAGAT AACTTGAGTC TTTATCCCCT TTTTATTATT AATTGCCTTG ATTTAAAAAT GGGGCAAACT 000800
000801 CAACAGAAAG ATGAAAGCAA TCTTATATAG AGCCGCATTT CATTTGCCGT AGGTCTTGTT TTCCAGAGCT ATCTCCAACT 000880
000881 TTGCCACCTG AGAAACACAA GTCCAAGTCC AATACTTACA GAAGAAATAA CTATTCCACC TAGTCAAGGA ACTAGCCAAC 000960
000961 ACTTAATGGA GGATTGCCCT TGGTTATAGA GCTAACTGCA AATGAAGTAA CTAGAGGAAG ACCATTTACC TTCTCCATTG 001040
001041 AAGAGACCAT TCAAGAGCCA ACTCAGCAAT CAGGGTCTAG CAGTGTTACT GACTGGATGA CTGGCACTTA GAGTCCAGCA 001120
001121 CCCTGCTGAG AAACCAGCAA CCCATGTGAG GATTCCATGG CCAGTAAGCA TGCTCTGCTT CTTGACTTTA TGTAGAGGCT 001200
001201 GTTGGTTAAC TTTCCAGTGC AAATTTTGTT CATTTGGATT TCCCTATTTT GTCTGTTTTT CCTTTTCATT CATGCACATT 001280
001281 TTACAGTCCA CCACTCTGCT TGGCTCCTTa tatagtttgg atatttgtcc ctgcccaaat ccACTGAGAT CACAAGACTC 001360
001361 TTGAACAGAA GAAATGCCAA GAGAGCTAGA ATCTTACAGA TGGTGGTATT AATAATGGAG CAAACTAGAA CCAATGACAA 001440
001441 AGACATGAAG TCTGAAAATA GCACAGAGAA TATAAATATT GTGAGATGAA TGTTCCCCCT TCAATTCTCC TTATTTGCCA 001520
001521 AATATTTTCA TTTCCTTTTG TCATTATAGA AAATAAAACC ATGCATCACA GTCAAAAGTG CTCCA
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Predicted Small Protein

Name NONHSAT120275_smProtein_1169:1363
Length 65
Molecular weight 7366.6899
Aromaticity 0.1875
Instability index 71.9828125
Isoelectric point 7.51470947266
Runs 11
Runs residual 0.02328125
Runs probability 0.0510510510511
Amino acid sequence MLCFLTLCRGCWLTFQCKFCSFGFPYFVCFSFSFMHILQSTTLLGSLYSLDICPCPNPLR
SQDS
Secondary structure LEEEEEELLLEEEEEEEEEELLLLLEEEEEEELHHHHHHHHHHHLLLEELLLLLLLLLLL
LLLL
PRMN LLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLL
LLLL
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