NONHSAT053127
Revision as of 17:30, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT053127 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
677 nt |
Genomic location |
chr17+:34190940..34191616 |
Exon number |
1 |
Exons |
34190940..34191616 |
Genome context |
|
Sequence |
000001 atgcggtgtt TCCAGTAAAG GCAGAGAATG TACTCTGTTC TGGCTTTCAG ACTTTCCTGG CTTTTCAGTC CAATGTCTTT 000080
000081 TCGGTTAGAC CAGGGAGATC TTCAGATTCT TCCTTCCCTA TCTTTTAGAT CCAGCTGCTC TTCGAAGAGG CCAAGGACAT 000160 000161 GGGATGGGTC ATGCTGCACA GTGGTGGCTG TGTCCTTACT GGATCTGACC CGCCATCCTA GCACCCCGGG GAGCCTCGTC 000240 000241 TGTGCCCACA TGCCACACAT CTCAGACCCT GTTTCCTTCT TTCCTGAACT CCAGCAGTTC TCAGACTCAC CACCTGCTGT 000320 000321 AGTGCCTCCA TGACAAACTT GTCACTGATG CGTAAGCATC CCAGAGCCTG CAGGAAGAGG GATGGAGGAA AGAGAAGGAA 000400 000401 ACTTGGACAT CATCCCCAGG AGTTACCATT CTCTGGATAC AGCTGGAGTT TGTGCTTGGA ATACCATCCC CACAACCACC 000480 000481 ATCACGTCAA GCAGCTTTTT ACTTTCCAGC TTGGCCAACT CCTGGCTGTA ACCACCCTCC TCTATCCTTG CCTCTTCTCA 000560 000561 CCTGTGCTGC ATAGAACTGC TCATCCTCTC TGGGAGATTC CAGGCTTTTT GTGAGTTCCT GCCCATCCAA GGCAGCCAGT 000640 000641 GGAAAGGAAG ACAGAGAAAA ATAAAGAATT TCAAACT |
Predicted Small Protein
Name | NONHSAT053127_smProtein_329:613 |
Length | 95 |
Molecular weight | 11030.7915 |
Aromaticity | 0.106382978723 |
Instability index | 50.8021276596 |
Isoelectric point | 10.0386352539 |
Runs | 9 |
Runs residual | 0.0330712303423 |
Runs probability | 0.0470666745177 |
Amino acid sequence | MTNLSLMRKHPRACRKRDGGKRRKLGHHPQELPFSGYSWSLCLEYHPHNHHHVKQLFTFQ LGQLLAVTTLLYPCLFSPVLHRTAHPLWEIPGFL |
Secondary structure | LLLHHHHHLLHHHHLLLLLLLLLLLLLLLLLLLLLLLLEEEEEEELLLLLHHHHHHHHHH HHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |