ENST00000446698.1
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==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000446698.1 |
Source |
Gencode19 |
Same with |
lnc-TMEM178-1:7,NONHSAT070238 |
Classification |
intergenic |
Length |
593 nt |
Genomic location |
chr2+:39681063..39851496 |
Exon number |
5 |
Exons |
39681063..39681072,39681438..39681506,39743555..39743682,39745724..39745851,39851239..39851496 |
Genome context |
|
Sequence |
000001 GAGACTACAG AGAGAGAATG CTAACGAGCT GTGAAATGAC CAAAGATCTG GCAGCAGAAG GGAAAAGAAA AAATAATGGG 000080
000081 AAGAAGAGGA TTTATCTGAC TCAACTGGAG ATGGCTCCCT TCCCTTATTT ATTGTTGCAT CCTGAAGCTT CCCCCATGCT 000160 000161 GGGCTCAGTG TGAACAAACA GCGCGGGAGA ATGCAACCAC TGCAGAGGCA TATGTTTGAG ATACCTGGCC ACTGGAGGTC 000240 000241 ATCTCGTCTA CTATATTCAC CGCAGATAAA GAATGAAAAG AGAATACACA ACCTTGTGAT TGCTAGCAGT GAAAGCTCAG 000320 000321 AGTTATGACA TAACATGCTG CAGTGCTGGC AGCCATCCCG AGAAGGCTCT GAAGAGTGGG CTGGTTAACA GGAGCATTTT 000400 000401 CACTGCAGGC AGACTCGGTT GCCTTGGTGA AGTCCCCGTG CATCTGAAGA GTGGCTCATC TGTTCCTGCC TGGGGATCAC 000480 000481 TTGTGCTCAT CCAGGCATGG CCCCCACCAG AAATCTGGGA GAATGGCGAG CTGGTGCCAG CTGAACTGTG AACCTCTAAG 000560 000561 AATAAGTGAA TAAAACGATT TTATGCACTA CAA |
Predicted Small Protein
Name | ENST00000446698.1_smProtein_17:172 |
Length | 52 |
Molecular weight | 5723.7317 |
Aromaticity | 0.0588235294118 |
Instability index | 44.3901960784 |
Isoelectric point | 8.93133544922 |
Runs | 6 |
Runs residual | 0.0365948359542 |
Runs probability | 0.046119649061 |
Amino acid sequence | MLTSCEMTKDLAAEGKRKNNGKKRIYLTQLEMAPFPYLLLHPEASPMLGSV |
Secondary structure | LLLLHHHHHHHHHHHHHHLLLLLEEEEEHHHLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |