ENST00000446698.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000446698.1

Source

Gencode19

Same with

lnc-TMEM178-1:7,NONHSAT070238

Classification

intergenic

Length

593 nt

Genomic location

chr2+:39681063..39851496

Exon number

5

Exons

39681063..39681072,39681438..39681506,39743555..39743682,39745724..39745851,39851239..39851496

Genome context

Sequence
000001 GAGACTACAG AGAGAGAATG CTAACGAGCT GTGAAATGAC CAAAGATCTG GCAGCAGAAG GGAAAAGAAA AAATAATGGG 000080
000081 AAGAAGAGGA TTTATCTGAC TCAACTGGAG ATGGCTCCCT TCCCTTATTT ATTGTTGCAT CCTGAAGCTT CCCCCATGCT 000160
000161 GGGCTCAGTG TGAACAAACA GCGCGGGAGA ATGCAACCAC TGCAGAGGCA TATGTTTGAG ATACCTGGCC ACTGGAGGTC 000240
000241 ATCTCGTCTA CTATATTCAC CGCAGATAAA GAATGAAAAG AGAATACACA ACCTTGTGAT TGCTAGCAGT GAAAGCTCAG 000320
000321 AGTTATGACA TAACATGCTG CAGTGCTGGC AGCCATCCCG AGAAGGCTCT GAAGAGTGGG CTGGTTAACA GGAGCATTTT 000400
000401 CACTGCAGGC AGACTCGGTT GCCTTGGTGA AGTCCCCGTG CATCTGAAGA GTGGCTCATC TGTTCCTGCC TGGGGATCAC 000480
000481 TTGTGCTCAT CCAGGCATGG CCCCCACCAG AAATCTGGGA GAATGGCGAG CTGGTGCCAG CTGAACTGTG AACCTCTAAG 000560
000561 AATAAGTGAA TAAAACGATT TTATGCACTA CAA
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Predicted Small Protein

Name ENST00000446698.1_smProtein_17:172
Length 52
Molecular weight 5723.7317
Aromaticity 0.0588235294118
Instability index 44.3901960784
Isoelectric point 8.93133544922
Runs 6
Runs residual 0.0365948359542
Runs probability 0.046119649061
Amino acid sequence MLTSCEMTKDLAAEGKRKNNGKKRIYLTQLEMAPFPYLLLHPEASPMLGSV
Secondary structure LLLLHHHHHHHHHHHHHHLLLLLEEEEEHHHLLLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -