NONHSAT033775

From LncRNAWiki
Revision as of 16:49, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here. ==Annotated Information== ===Transcriptomic Nomeclature=== Please input transcriptomic nomeclature information here. ===Functio...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT033775

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1221 nt

Genomic location

chr13+:50554204..50555424

Exon number

1

Exons

50554204..50555424

Genome context

Sequence
000001 agccaagatc gtgctactgc actcctgcct ggtgacaaga gcgagactcc gtctcaaaaa aaaaaaaaaa aaTCATTATT 000080
000081 ATTTCACATG TGCTTTATAT CTTATGTTTT GATTTATTTT TAATCAGCAG GGGTTTGTAA TTTCAGCTTT TAGTTACTCC 000160
000161 TGCTATTAAG TATTGAATGG ACAAACACTA CTTAAAACAG TGTTACACTT CTTTTGAAAT ATGAGGAATC CTTTTATTTA 000240
000241 TCTGTGTGCA AATAACATGT TTCAACACTA CTGTTAAGTA TTCTGTTAAA GTACAAGTCT ATCCCTTAGG AGGGGAGGGT 000320
000321 ACACTCTACA AGAAGTTTTT TTCCCCAGTC TCTATGGGGT GGTTATTTCT GTAATCCTAT TTATGGATGA AGCAGGGGAA 000400
000401 ATACAGTCAT CACTGGGGCa atgataagag ctactgtgca ctgagggttt accatgtgcc tgtcagtatg ggcagtctat 000480
000481 atcctctacc tccttcctca cagagatccc atggtggggg ggcccagtta ccctcatttt acagaacagt aaacaggctc 000560
000561 agggagattc agtattgagg ccccaagcct ggaagttatc ctccatttct cttttcctct ttggcccctc ctccaattta 000640
000641 ttaacaagtt ctgtcagcta taactccaaa atatattttt aaaatatgac cttttttcct accctagctc aagtcctcat 000720
000721 tatctttctt gcttagatgt cgcattagcc tccaaactgt cccccggggc cactcttacc cttagtacca tcttccttcc 000800
000801 acacaatggg cagggtgggt ttttttagtt gttgttgttt gtttgttttt tgagacaggg tctaagtcta ttgcccaggc 000880
000881 tgcagtgcag tggtgtggtc atagctcatt gcagcttcaa tctcctgggc tcaagtggtc ctctcacttt agcctttcaa 000960
000961 gcagcttagg ctacaggtgc ataccaccac acctggctaa tttttaattt tttgtagaga tgcagtcccg ctatgtttcc 001040
001041 taggctggtt ttttgttttg ttttgttttg ttttctgaga tggagtcttg ctcttttgcc caggctggag tgcagtggtg 001120
001121 tgatcttggc tcactgcaac ctctgcctcc cgggttcaag tgattttcct gcttcagcct cctgagtagc tgggactacc 001200
001201 agcgcccacc actatgcctg g
[back to top]

Predicted Small Protein

Name NONHSAT033775_smProtein_386:577
Length 64
Molecular weight 7238.1306
Aromaticity 0.126984126984
Instability index 56.0461904762
Isoelectric point 9.91656494141
Runs 7
Runs residual 0.0338516358925
Runs probability 0.0238726121079
Amino acid sequence MKQGKYSHHWGNDKSYCALRVYHVPVSMGSLYPLPPSSQRSHGGGAQLPSFYRTVNRLRE
IQY
Secondary structure LLLLLLLLLLLLLLLEEEEEEEEEELLLLEELLLLLLLLLLLLLLLLLLHHHHHHHHHHH
HLL
PRMN -
PiMo -