NONHSAT063981
Revision as of 17:59, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT063981 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1102 nt |
Genomic location |
chr19-:28221238..28262880 |
Exon number |
4 |
Exons |
28221238..28221615,28223704..28223875,28237006..28237248,28262572..28262880 |
Genome context |
|
Sequence |
000001 AAAAAAAAAA AAATCCAAAG GTCAAACTCA GTTTGCAGGA AGGAGCATAG GAGAATAAAG GATGGAACAA AGAAGAAAAA 000080
000081 GAACAGCAAG TTACTCTGAG TATTGTGGAA ACAAACTGAA ATTAGAGTGA GAGAGAGAGA GAAAAAAAAA GAAGGTCCGA 000160 000161 gcaatctcag atatatgaga ggccaagatg ggaagatcac ttgggtaaga ctgggaagat tgagtctgca gtgagtcaca 000240 000241 gtcgcatcat tCTGCTGGAT TTGAATGGTA CTGCTTCTGG CCCAAGTTGT CTGGGCAACC TTAGACATGg gtgtccatcg 000320 000321 cgcttccttc actgccttga tcatgtcggg gtcaccaccT GCGGgggttt gtcctgcaga ccctgactca acgacggatg 000400 000401 aataatgtac actgacacag atcttatgct tgtcagtcct gctgagcatc caggccactt acagactcca agaagagtcc 000480 000481 tgtcagccac ggctctgact tgttggccct cccggcattt atttagcaca catttaatga cagaagtctc aggctggaaa 000560 000561 cactcttttt gtagaacata caaatggaca tttctaagca cattgaggcc tataatgaaa aatcaaatat cccacaatga 000640 000641 aaactagaag gaagctatct gtgataatgc tttgtggtgt atggattcat ctcactgact gaaacctgag ttttgattca 000720 000721 ccaggttgga aactctttct gcagaatctg caaagaaata tttctgagcc cattgaggcc tacagtggaa aactgaatat 000800 000801 tctgtgataa aactagaaac accctatctg tgaaaatgct ttgtgatgtg tggatttttc tcatcgaatg gaacctctgt 000880 000881 tttgactcac aagggtgaaa cactatttta gtagaatcta ggaagaaaca tatctgagcc catttatgcc tacagtgaga 000960 000961 aactgaatac cctgcaataa aaagtagaca gaagctattt gtaaaaatgc tttgtgatgt gtggattcag tgttaaactt 001040 001041 ttattttgat tccacagttt tgacacccta tttgtagaat atatgaatga acatttctca gc |
Predicted Small Protein
Name | NONHSAT063981_smProtein_404:646 |
Length | 81 |
Molecular weight | 9342.6431 |
Aromaticity | 0.1 |
Instability index | 47.05375 |
Isoelectric point | 9.23638916016 |
Runs | 15 |
Runs residual | 0.0486842105263 |
Runs probability | 0.0489430607079 |
Amino acid sequence | MYTDTDLMLVSPAEHPGHLQTPRRVLSATALTCWPSRHLFSTHLMTEVSGWKHSFCRTYK WTFLSTLRPIMKNQISHNEN |
Secondary structure | LLLLLLEEEELLLLLLLLLLLHHHHHLLLEEELLLLLLEEELEEEEEELLLLLLEEEEEL LHHHHHHHHHHHHHHLLLLL |
PRMN | - |
PiMo | - |