Lnc-SOX1-3:4

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	lnc-SOX1-3:4
Source	LNCipedia2.1
Same with	,
Classification	intergenic
Length	2827 nt
Genomic location	chr13+:112851664..112855312
Exon number	2
Exons	112851664..112851722,112852545..112855312
Genome context
Sequence	000001 GGTTCCTGTT CCCACGGCTG CCGCATCTAT TATGCCCGCG CCCCTCCTGT TCCATGAAGG TTCTGGATGG AGGTCTCATG 000080 000081 AGGGATTCGG GCAGAGGCTG ATGAAAACAT AAAACAGGCC AGTCTCCAGA TTCAAGGGAG AGCTGGAGAC AGCATTCATA 000160 000161 GCTTGACCAG GCAGCTTTGA CCAGGTGTGA CAAAGGAAGC CCAGATGTCC CAGTCTATTC ATGTTTCTAT CACAAAATGC 000240 000241 CTTTGAATTA GTAATTTATA AACAATAGAA ATTTATTTCT TATCGTTCTG GAGGCCGGAA AGTCCACGAT GAAGACACCA 000320 000321 GCTGGTTCCC AGCCGGTGGG TGAGGACCCA GCCTCTGCTT CCAAGATGGC ACCTCTGGGC TGCATCCTCA CGTAGGGAGG 000400 000401 GGGTGGGAGA AGAAAAGGGG CTGGGCATGC CCTTCAGCCT CCATTATAAG GCACGGATCC TGTTCACGAG GGAGGAGCCC 000480 000481 GCATCACTCA GCCTCCTCTC AGAAGGCCCC ACCTGTTAAC ATCACACGGG GCTTAGGTTT CACTGTACGT ATTTGAGAGG 000560 000561 CACCTACATT CAGACTATAG CACAGGCCAG CCCCCCACTG CTTCCCATAC TGCCAGAGGC TGGGGCAGCT CCCCGGCCAC 000640 000641 CATGTTCCGC CAGCAGGATG GCTCCTGTCA GCCAGGTGTG CGGGACCTGG GCACACTGGC AAGAAGCAGG GAGGGCAGCC 000720 000721 CAGACCCAGC CGCCCCATGG CTGCTCCGGG AGACTGTGTC CCTGTTGGAG ACTGTGATAG ATCCACGATC CGTCCCAGCC 000800 000801 ATTGCTCCAT CTGTCTTGTC CATCAACCCC TCTGCCAGTA TCATATGGTA AATAGTACCA TGAATACTAC AGTTCCAGGC 000880 000881 ACCCAGGTCA CATCAGAGAA CTGACGAGTT AGAGTTTAAC GACACAGTTT GTAGCTGGGG GGGCTGCTTC AGAGCTGATG 000960 000961 ACTGGGTGGC ATTGCTGCCT GGAGCTGGTG ACTGGGTGGC ATTGCTGTCT GGAGCTGGTG ACTGGGTGGC ATTGCTGTCT 001040 001041 GGAGCTGATG ACTGGGTGGC ATTGCTGCCT GGAGCTGGTG ACTGGGTGGC ATTGCTGCCT GGAGCTGGTG ACTAGGGTGG 001120 001121 CATTGCTGCC TGGAGCTGGT GACTGGGTGG CATTGCTGTC TGGAGCTGGT GACTGGGTGG CATTGCTGCC TGGAGCTGGT 001200 001201 GACTGGGTGG CATTGCTGTC TGGAGCTGGT GACTGGGTGG CATTGCTGTC TGGAGCTGGT GACTGGGTGG CATTGCTGTC 001280 001281 TGGAGCTGGT GACTGGGTGG CATTGCTGCC TGGAGCTGGT GACTAGGGTG GCATTGCTGC CTGGAGCTGG TGACTAGGGT 001360 001361 GGCATTGCTG CCTGGAGCTG GTGACTAGGG TGGCATTGCT GCCTGGAGCT GGTGACTAGG GTGGCATTGC TGTCTGGAGC 001440 001441 TGGTGACTAG GGTGGCATTG CTGTCTGGAG CTGGTGACTA GGGTGGCATT GCTGTCTGCA GCTGGTGACT GGGCGGCATT 001520 001521 GCTGCTTGGT TGTTGTCAAG CCTCCCCAAG GTCTAAGGTC ACCAGCAGGA ATGCCCCGGA AGGAGAGGGC ATAACTGTAG 001600 001601 TTCTAGGAGT CTGAGGCCGT TTAACCTTTT CTCCATCATT TAGCAGCTTA GAAATTCATG TCATTCCCCA TCTAGGCCTC 001680 001681 AATTTCTCTA CCTGTAAAAT GGGATGTTTG ACCCGACTTC CCTTTACCTG TGAAATCCTA GGACCTCATC ATGTCACTTT 001760 001761 CATGCAGCAG AGGCAGCGAC CACTGGAGAG GGACACTAAG GACTGCTCCT GGATCTTGTT TAAACACAAG GAGCTGGGTT 001840 001841 TCGAAGACTC CACGAGGGAC TTTAGGACCC TACGTTACTT ATCGACATAA AAAGAGGAGA AGATAAAGCC TCACAATTCT 001920 001921 TCCTCCCACT TCCTCAGGTG GCCAATGCTG CTTTTATTGT GGAATGGGTT TGCCACAAAG CCTCAGGCTG ATAGATAAGA 002000 002001 CTCGGGTCTC TGAAAAATGA CAGCTTGACA TCAAACCAAC AAAATCAATT TCCAAATTGA TTAAAACCAT TCTCAAATAA 002080 002081 AACTCCGCTG GCTTTTTCGA ATCCCATTGT AAAAGGTCAT CTGGGAAGTA AGCACCATAT TTGTTTTAAG TTAGCAGAAG 002160 002161 CCCGCAGCGC ACTTGAGGCC CTACAGTTTC GGGGCCAGGC TGGGCTGACT GGGCCCACAC ACGCCTCCGC CCTCACCACA 002240 002241 GCCGCCAGCT CCAGGGTGCC CACCAGAGCC AGGGCGGGAA GCCACCTCCA GGCTGGCCCT TCGTCTTGGC TCTTTGAAAA 002320 002321 CCTTTGGGTG AGGTGTGTCT CTTGGATCAA ATAAACAATC AACAATTGGC TGCTGTCATT AAGGGAGAGG GTTAGTGCTG 002400 002401 AGGGAGACAT ATCCTGGGGG CATTTTGTGT GATTATGGGG TGATTTATGA TTCATAGAGA TCAAGCGATA AACGTACTGA 002480 002481 AATGCCAAGA AAGAAAATTG GAGAGAAAAA TTGCTACAAA TGTTATTCTT ATTTTTTAAG GAGATTTATT TTATTTGCAA 002560 002561 GATTTGTAAT TGATGCAAAG CCTGTAAATG CAGGTGCCCC ACTGTCAAAT CCTCTCCCTT CCAGACCCTT CGTAAAGGCG 002640 002641 TGACCTGCTT CAAGAAACAC GATATTTGAA AATATGAAAT CTACACATCG AGACACATTA AGAGTGACTG TTCGCATGAC 002720 002721 AAAAGGGTTT GCCACTTTAC AAAAGATTCA TCCCAGTGTT TCTTAAAGAA CCATACAACT GTGATGTATT TTAAATGTCT 002800 002801 TTCAATTAAA AGAATTGACT CATGCTC

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