NONHSAT090160

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT090160

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1720 nt

Genomic location

chr3-:60521543..61237058

Exon number

6

Exons

60521543..60522712,60807613..60807705,61151248..61151501,61152646..61152715,61186291..61186339,61236975..61237058

Genome context

Sequence
000001 CCCAGTGGGC ACACTCCCAG GCGGCGCTCC GGCCCCGCGC TCCCTCCCTC TGCCTTTCAT TCCCAGCTGT CAACATCCTG 000080
000081 GAAGCTTTGA AGCTCAGGAA AGAAGAGAAA TCCACTGAGA ACAGTCTGTA AAGAGTGAGA AGTGGACCTT GGACCACCCT 000160
000161 GTCTGGAGTC ATTCCCTGGG CTTCTCCAGC CCCTGAAGAA AATagtctca ctcttgtcac ccaggctgga gtgcaatggc 000240
000241 tcgatctcag ctcactgcaa cctctgactc ctgggttcaa gatattctcc tgcctcagtc tcccgagtag ctggtattac 000320
000321 aggcatgcgc caccacacct ggctaatttt tgtattttta gtagagacag agattcacca tgttggccag gctggtcttg 000400
000401 aactgctgac cttgggtgat ctgtccacct cagcctccca aagtgctggg attacagGTA TCCTAGGAAT ACCTGCCTGC 000480
000481 TTAGACCCTC TATAAAAGCT CTGTGCATCC TGCCACTGAG GACTCCGAAG AGGTAGCAGT CTTCTGAAAG ACTTCAACTG 000560
000561 TGAGGACATG TCGTTCAGAT TTGGCCAACA TCTCATCAAG CCCTCTGTAG TGTTTCTCAA AACAGAACTG TCCTTCGCTC 000640
000641 TTGTGAATAG GAAACCTGTG GTACCAGGAC GTATCCTTTC TTTTTTTTTT TGGAGAGGGA AAATAAAAGT CTTCTGAGCC 000720
000721 TAACCAGCCA AATGAATATA AATACAAGAT TGGCCTCCAG TCTGTCCAAA AAGGTAAATA AAGAATCCAT CTCCCTCCCA 000800
000801 CTTCGGAGAC ACCAGGTAAG ATGTTACTCA TATTTATTCT GAATCCAGTT GGTGGCACCA GTAATATGCT TGATCAATGT 000880
000881 TGCAGAACTT CTGAGGAGAG TTGCTTAGCA ACCGTGGCTT TGGAGGTGAA TTTTTGCTTG ACCTTTTCAC TACCATAGCT 000960
000961 GAGTAAATAA ATAGGTGCTT CTAAAATGAG CCCAGTGAAT ATCACGGGCA CTTGGTTTTC AGCTTATCTG TTGTGAATTT 001040
001041 TAATAGTAGA TTGAGTGGTG CCTTTGTGAT GTGGAAGTAA GATATGTGAG GATTTGAGAC TGACTTTGTT GCTTTACCTC 001120
001121 TTGGAGATCA TTCAAGTTGT GCGttttaat taaatttata ttatagatat acttacaaat tttttttaaa aaatattaGG 001200
001201 ACCTGAAATA GCATTTTCTC TTGGGAAAAA TACCAGCTTG CAGATCATTG ACCAGTGTCA TTGGTGGAGT TGTTTTATTT 001280
001281 CCCTCTGACC ACTGAGTTGT AGTCTTTCCT CCTATAGACT TCAATAGGAG CTTTATTCTT TTGCAGTGGG AATAACAAGT 001360
001361 ATTGGTGAAA TGCTTGGGAA GTTATCTTTA TGTTGTTAAA AGTTTCACTC CTGATTGTGT GCATATGAAT TTTGTACGGA 001440
001441 CTCTTCAGGA TGTTTTTCTC TTTCCTCCTT CACTTAGTTT GCCATGCAGA AGGCAACAGA ATAAAATTTG ATATTTTCAG 001520
001521 ATAATAAGTA TTTTCCACGC TGAGACATGA TTTTGCTTTG AAATGAATTT CTTAGTAATT CTGAATGTAC AAATATGCCA 001600
001601 AGAGGTTTTT CAGAGTAAGC TACATTTTTT TTCCAGTGAA AATGTGGAAA GTGCCTGAGA ACTTTATGAA CAAGCTTCTT 001680
001681 TTCTAGCCAC GTAACTATTG TATGCTAAAA AAAAAAAAAA
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Predicted Small Protein

Name NONHSAT090160_smProtein_731:841
Length 37
Molecular weight 4253.9504
Aromaticity 0.0833333333333
Instability index 64.3555555556
Isoelectric point 10.545715332
Runs 5
Runs residual 0.0415695415695
Runs probability 0.0433139021374
Amino acid sequence MNINTRLASSLSKKVNKESISLPLRRHQVRCYSYLF
Secondary structure LLLLHHHHHHHHHHLLLLLLLLLLLLLEEEEEEEEL
PRMN -
PiMo -