NONHSAT091505
Revision as of 19:32, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT091505 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
394 nt |
Genomic location |
chr3+:122405606..122411186 |
Exon number |
2 |
Exons |
122405606..122405960,122411148..122411186 |
Genome context |
|
Sequence |
000001 gtccagccTC AATAAATATT AAACAAGGGA AAAATTATGA GCTAAGATGT TTCTCTGATG TAGGATGTAC CTCATATTCC 000080
000081 CAAATGCTTG GTGTTAATTG AGGTTTCTGT TATTTGTGTC TCATCTTCAT TGGTGATTTT TGTGACTTGC AAGTGAATAT 000160 000161 GCCACTATAT ATGGCCCCAG ATGTATTCAA GAGCACCCTT ATCAGACCTT TTCATTATTG TTTCTATTTA CCCTCCATCT 000240 000241 CCAGGCTGGT CCCAGGGACA TTTTCTTATG TAAATAAATT GTTAATCATG TATTAATGCT ACTTTATTGT TTGTGTTTCA 000320 000321 GGAATCCAAG ACCAAAGAAG ATGTTAAAGA ACCAGATGTG TCAGAAGAAT TGGATACAAA ACTCCCTCTT GATG |
Predicted Small Protein
Name | NONHSAT091505_smProtein_158:295 |
Length | 46 |
Molecular weight | 5334.3863 |
Aromaticity | 0.2 |
Instability index | 83.4957777778 |
Isoelectric point | 9.35980224609 |
Runs | 7 |
Runs residual | 0.00669191919192 |
Runs probability | 0.0678830090597 |
Amino acid sequence | MPLYMAPDVFKSTLIRPFHYCFYLPSISRLVPGTFSYVNKLLIMY |
Secondary structure | LLLLLLLLLLHHHLLLLLEEEEELLLLLLLLLLLHHHHHHHHHHL |
PRMN | LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLL |
PiMo | oooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiii |