NONHSAT092429

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT092429

Source

NONCODE4.0

Same with

,

Classification

sense

Length

3419 nt

Genomic location

chr3+:141087332..141108679

Exon number

4

Exons

141087332..141087646,141088714..141088788,141100267..141100329,141105714..141108679

Genome context

Sequence
000001 GAAGCCAGGA AACTAGTTGG GGAGTGGCAC TCGCAGCTGC AGCAAATCTC AAAATAAAGA GGCAACGGCC TTTCTCTTCC 000080
000081 TCTCCATCTC CCTATAGCAC ACCTTTTATT TCTTTTCTTC TTTTTTTTAA GCCTCACGAA AGATTTTACT TGTAGATCAA 000160
000161 CTTTCAAAAT GTAGGAAGTC AGAATGGGTG ACATCATCAG AAAAATATGT GGAGCTGATC ACAAGAAGTG AAGAACCCAG 000240
000241 AGCACGAAAG CGGTTGTGAC TCCTGGGCCC AGGGAGTTGA CAGCGTCTGG GTTTCAGAGG AGCCAGCGCC TCCGAGTTGT 000320
000321 CTTGAAGTGA GGCTCTGCTG TAGTCCTGTT CTTCTGGCTC TAAGATCTGA ATGTTGTGAC CACTAATTTG CTCTTTCCTG 000400
000401 GAGAGTAACC CCAGTTTGGT CCACAAGGCT TGCTGCCCAA TCTTTGCCAA CAGTTGAACC AAGACTCTGA GGCTGATATG 000480
000481 CAATGTCACT TACAACATTA ATCAGATACT GCATTTAAGG TGAGCTGTCC CTTGCCTCCT CCTTCCCCAG TGCTCGTGTG 000560
000561 CTGCATGCAG TGCGTATCTT GCTTCTGCGA GCCTAAGATG GCAGGCAGGA TTAGCCGTGC TTGTGCTGTG TGTGCATGCT 000640
000641 GTGTCTAGAA TTCATTACAC GTTGCCTAGT ATTTCAGATG TGAGTATGTA AATGCTCTGT ATGCCATATC ATCTGGTAGC 000720
000721 GAAGACTTGT TTTTGCCTCA TTACAGCCTT AGATATTTCA ACATCACCTT TCATTTCCAA TTCATTTGCT TCTGGATGTT 000800
000801 TGTTTTTCAT CACATTCAAA ATATGATTTT ACCTTTTTTT TTTTAACAAA ACCAAAACCC CCCACAAACC CTAAAAACAA 000880
000881 AAACAACAAC AACAAAACTC TGCTACCAGA TGGTGTCTCT CCTTTCTTCG TGCATTTGCT GTCTTTTAAA TAATGTATGT 000960
000961 TGTATTGTTA ATTAATGTGA ATATCAAATT AAACACTTGA AACTTACATG TTTATTATGC AGGTAGGAGG CAAGGTGGAT 001040
001041 TCTATTTTTA ACTCTTATGC ACTCCATCAT GTGCAAGCAA CTTGGGTTCT CAAATTTGTA TTTTCAATGC TGGTATCAGT 001120
001121 GGTTTGATTT TCAGCAAATG TGACAGTGGC CTTTGCAGTG GTCAGCTCCG AGCTTTGAAC TCTCAGAGGA GGAAGGGGAA 001200
001201 AAAAATTCAA CACACCACCT CCTTGGTTGC AGTCTCAGAA AAACCTTGGA TGAGAAACTT CTTTTTTCAA TCCTGTTTTC 001280
001281 CTGTTGATAA ATTCAGTTCT GTGATCACAG TTCATTCAAG CTGTTCTGCG TATGATTTTT GTGTGTATGT GACAATTGCA 001360
001361 TCTAAAACTT GTGAGCAAGA AGACAGAGAA ATCAGTTGGT CTCCATCGCT TTACATAAAA ATGGCTGAGT GTCTTGTCAT 001440
001441 GCTAGCACTG CATTAAGTGA TGCATACAGG TAGGTTGAAA TTTGCATGTT TTTATAGTTT TTTTTGAGCC ATGCAGCAAG 001520
001521 AACATTAGAT GCATTAGAAT ATGACTTTTA AAAAAACAAA AATTAAATAA GACAGCTGTA ATCTTTTGGG GGAGGGTTTT 001600
001601 TAATTGGACA GCCTCTGCTA TTCAGATAGT ATATAAATGT ATAGCTTTTA CAAACTTAGT AAATGATTCT GCCATAAAAG 001680
001681 GGAGattttt tttaaaaaaa aatcatatat atGATAGGTG TGGTGCCATT AGACAACAAA AGAATTTTTT GAAAAGAGTG 001760
001761 ATGATTCAGC TCCATTTCAG CTTGAAACTA AAAATAAATG GGTTTCTGGA GATGATTTCA AAGAGCGTAA ACAAGCTTAA 001840
001841 TAAGAAACat taaaaatatt taaattttaa GAAGCGGTCT TTAAACGTGT TTATGAAAGA TGAAAATAAA AACTGATATG 001920
001921 CTTCCAAAAT TAATTTTAGG TAATATACAA GAATACATTA TATTATGTAT ATAATTTGGG GGGATGAGGA GTTACAATTT 002000
002001 TTAAAGAGGG AAATATTAAA TATAGATGGC CCTCTTAAAA GAAATAGAGC TTCACTAAAT GAAACCGAGC CCCTAGAATG 002080
002081 GTTCATTGCA GACCATATAG CTGTGGTTCT GGCACTTTTC AAAATAATTT CATGAGCTCT TTCTTTTGAA CTTAACTTCT 002160
002161 CAAATATATT TTAGTTTCAA ATTTAACACT GGGCcagaac ctgtttcctt ggtaaccaaa tcgtatttaa acatgtaata 002240
002241 acagATATGC AAAAGAATGT CTTTAAAAAG GAAACAAATG TTTAATGAAA AATTTACAGT TCTTTTTCCT CTCATATAGA 002320
002321 ATCTGAACTG GTTTTAGATG GTTTTTAATG CGGTCTTCAA GCCTTAAAAA TTAAGCCATG TTTCTAAACA TATAGAGAAA 002400
002401 GCTTGCACAG TGACAGCTTT TCTCTCCCTC CTTTGTGCTC AGTACTTTCA AAATTAAGGT TTTCTTTGCA GTATGCTCCA 002480
002481 GAATGCAGGT CAAGGTTTGT GTACAGAGGT GTAGTTTCAT TATCACAAGT TCACCAGCGC CACTGAAACA AAAGGTATTT 002560
002561 CAGAAATTCT GAGAATCAGA AAATGCTTGT ACTCTTGCCT TCCCTGATCC CTCCGTTGGT AACCTCAGTG CTGTCGGTAG 002640
002641 AAAAGGACCC ACATCCAAGC CTACCCCTCC AATGACAAGT GCACCCTGAA CCTTTGTGGA AATATCTCTA TAGGTGTGTT 002720
002721 AGGAAGATGG TGCTAAACCT GAAACCTCCC CGAGGTTTGC TTCAATGTGA AGAACATTGA GATTCAAAAC CATCTGTGTA 002800
002801 AATGGCTGCT TTATTCTAGC AGTTTAACTA ATATTCTATT CCATAGCACT ATCGTAGAAT TGAACCTCTC TAATGGGCTG 002880
002881 AAGGGTGGTG GTGGTTGTTG TCATGTTGTT TTGTGGCCAA CTAAAATATT TTGCTTGGAG TCTTTCTCTG GTTCAATTAT 002960
002961 TTTGGAACGT GATTCATCTC ATACTGATTT TGTTCTCCAG GCTTGCCATG AAATACCCTT CCTGCAACAC CTTTTTTTTT 003040
003041 TTTTTTTTTG GCTGTTGGGA GCCATTTTCC TTCTTGCCTG TGACTTTAAA TGACTAAGTA CATTTTGAAT ATAGTATCAA 003120
003121 TCAGAAGATT GTAAACTGAA GGGAAATATC AGAAACCTGA TTCAATATTG CCTATTTTTT TTAGTACCAA CAGCATTAAC 003200
003201 AGTTGCAATA GGATCAAGCT AATTGTCATT CGCTCTTGAG CAAATAATGA GCCAGGCATT TATAATTAAA ACACTACTGC 003280
003281 TAGTCAGAAA GCTTATAACT ACAATGTCTT CTATTTTGAT AGGCCAGTAC AAAGTAATCA TTTTGCACCT ATTTGAATCT 003360
003361 TAATTACAAG ATTAGATGGA TGCAATGCAA TTGTTTTACC ATTAAAATGA ATGCCTGAT
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Predicted Small Protein

Name NONHSAT092429_smProtein_1964:2134
Length 57
Molecular weight 6583.6089
Aromaticity 0.107142857143
Instability index 54.3589285714
Isoelectric point 4.87347412109
Runs 7
Runs residual 0.0282982045277
Runs probability 0.00948848007671
Amino acid sequence MYIIWGDEELQFLKREILNIDGPLKRNRASLNETEPLEWFIADHIAVVLALFKIIS
Secondary structure LEEELLLHHHHHHHHHHHHLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHH
PiMo i???????????????????????????????????????????????????????