NONHSAT021887

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT021887

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3770 nt

Genomic location

chr11-:63391556..63395325

Exon number

1

Exons

63391556..63395325

Genome context

Sequence
000001 CTGGTAGCTT TAAGATAGCT TTGCCTTAGC AAGGATCAAA GTCCTACCCA AATATAAAAA ATATCTAGAA GTATCTAAGA 000080
000081 GTTCTTTTTT TCTATTTACC TTGATTAGGA GATAAAAGTT TTATCTGTTA GTTGCTTTTC CTTTTGGAAT TATTGTGGAT 000160
000161 TTTAAAACTT AAAACTTGCC TGCAAGTATT TATATAAACA TTCAGGTATA TAAGCCTTAA TTTCTAAGAT AATTTAACTT 000240
000241 TTGTTATGGG AGGGAGGTAA GAGTGTAAAT TTTATATACA TGAAGGTAAG ATCTGAGTGT AAACTTTACA TACATGAAGT 000320
000321 ATGAATGGAA GGTAGAAAAA AAGTCCCTTT TCGCATGTAA TCTCTTTATC AAAGAATTTT CTTTTGACAC TTTACCACTG 000400
000401 AAGTATTTTT GTAAGTCCTA AATTCGCAGC ATATTGTTTC ATATTTATAT GCCATCTTGC AAATAGTTCT TGCTATTTTA 000480
000481 TTCACTGCTG TTACACTTTA GAAAAATTCC AGCTTGTTTA CTTGCATTTA TCAGTGATGC CAACCAAGCT TTGACTGTTA 000560
000561 ACTTGAAAGC TTGCTTCTGA AATGTTGGTG CATTTTCAGG TGACCTCTTA TCTCTCTGAA AGTTCATACC TATTAGCAGG 000640
000641 CTCTGTAAAT ATTGACATAC TTAGCTTTTA ATACATTCTA TAAGTAAATT TATAGATTTC AGAATAACTT AAAAAATTTA 000720
000721 ATGGTAAGAA GGGGTGATGT GTCGAAAACT CATACTAAAG TATTAGGTCA CTTTAAAAAA AGTGATAATG TATGATTTAA 000800
000801 TGAAATCTTA AGATTCAGTT ACTATTTAAA TTCACCATTT CTGTTTTGGT CTTATAAAGA GACCTTGGTT TAATTATCCA 000880
000881 GAGGAAGTCC TCTTCACCAT TTTTTTTTTT TCTTAGTTCT GCTTCTGGAA AGTGTTTTAT AAAGTTTTCT CAGTGAGGGT 000960
000961 TCTTAAGAGT TTTCTTTGGC CTCTTTTCTC TCAACAGTAA ATTGATGATT TTATATCAGC TTTTTCAATA AAAGATGCAT 001040
001041 TATCATTACT GGCTATAAAT CATCCTGGGG AGATTTATAA CCAGGTTAAA AATAATATCT TTTACTTCTC TCACCTTTTA 001120
001121 CTTGTGGTTC AGATGCTCAG ACTGTGCCTG TTTGCGTCGT GTCTGTTGCT CTGCCGCTTT CCATGCAGGC ATTTTTAATT 001200
001201 TTACACAATC CTAACAATAT ATGGAACTCA TTCCTATGAA TATATAAAAG GAGGCTTCCA AAATTTTCTA TTAAAATATT 001280
001281 TCAGGATAAA TTAAGTGTTG ATAATTTGAA AAAATAATTT CAATGAGCTG CTTATAGTAA AAATGGTAGA ATCAGAGTTT 001360
001361 TCATTCTTTG AGAAATCTTT CTGTAAGATT GGCTCATAGA TAAAATGAGA CAAACTACTA TGTATGATAA AACACCTTCA 001440
001441 GAGTCATGCC TTGTTTTATT TTATTTTATT TTTTGAGACA GAGGTCTCGC TCTGTCGCCC AGGTTGGAGT GCAGTGGTGC 001520
001521 AATCTCGCTC ACTGCAACCT CCACCTCCCA GGTTCAAGCG ATTCTCCTGT CTCAGCTTCC TGAGTAGCTG GGACTACAGG 001600
001601 TGTACACCAC CACGCCTGGC TAATTTTTGT TTTTTTACTA GAGGTGGGGT TTTGCCATGT TGGCCAGGCT GGTCTCAAAC 001680
001681 TCCTGACCTC AGGTGATCCA CTCCCCCCAG CCTCCCAAAG TGCTGGGATT ACAGGCATGA GCCACCCCGC CCAGCTGAGT 001760
001761 CATGCCTTAT TTTCGTAGTA TACCAAGAAA TGTTCTATGG AAGTTTACGT TTTAACACCT CTTTTATACT TGGTAAAATT 001840
001841 GCCTGTGTTT CGCTTTATTC CTTTTTTTTT TTGAGACGGA CTCTTGTACT GTCACCCAGG CTGAAGTGCA GTGGCGCAAT 001920
001921 CTTGGCTCAC TACAACCTCC GCCTCCTGGG TTCAAGTGAT TCTTTTGCCT CAGCCTCCCA AGTAGCAGGG ATTACAGGCA 002000
002001 TGTGCCACCA CACCCGGCTT ATTTTTGTAT TTTTAGTAGA GACAGGGCTT CGCCATGTTG ACCAGGCTGG TCTCAACTCC 002080
002081 TCTGGGAATC CGCCTGTCTT GGCCTTCCAG GGTGCTGGGA TTACAGGCGT GAGCCACTGG AACCTGGCCT TGTTTTGCTT 002160
002161 TATTTTTTCT CTTACATGAA GTAAAGCGCT TTGGTCAAAC ACACAAAAAT ACTGCCTTGT ACTGGTGGTT GGTTTCATTA 002240
002241 GTGGATCACA CACAGTGTTC TACTTGGCTT GTAAAATGGT GCCTTGGATA GGGTGAGTTT GGATAAGTAT GTATGTATGT 002320
002321 ATGAGTTATA GCAAAATTAA GTAGATTGAA TCAAGTCCAT GCAAAAGCAA TAAAACAGTT TTAATTTTTT AATTTTTTAA 002400
002401 AAATTAAAAC TTTAATAAAA CAGTTTTTAA TTTTTTGCTA GGTTCTTTTA AAAAATGATG TAACTTACAT GGAAGTCTTC 002480
002481 ACAGGACTTT TTTCTTTCCT GGAACTATTG AAATGTAATT TAGGATGATT TGATCTTCCA TCTCAAGTTG TCAACATGGC 002560
002561 TGTGTCATTC TGGCTTACAT ATGTTTTATT TAACAAAATT CTAGTCAAGG GATAAGGGCA TAATGAAGAC AAGCTTCAGT 002640
002641 TATGAAAGTA CAAACTATTT GTGTGATTAA TTTTTAAAAA TGACATTAAG AAGCCCATTG TAAAATAATA TTTGCAGTCA 002720
002721 AATGGTTTTT CTTGCTGTAA GTCCTGTTGT AGCTATGTTT AGGGTAGTGG TTCTCATCTA CCTTGGAGTG CATAAGACTT 002800
002801 ACCTAGCAGG CTTGTTTAAA AAGTTCAGAT TCCTAGCTTT GTACCCAGGG ATTGCCTCAG GTGGTATGGG CTGTGGTCCT 002880
002881 GGAGTCATCA CTTTTATAAA TAGTGGTTCA GAGACCACAG AGAGAGACTG CTTCATCGAA TGGGAAGTAC CAAGGAGAAA 002960
002961 GTACAATTCA GTATTGTCTG GAGGCAAGTG GACACTTTGT ACCTGAGGTT TAGAATAGGT GGTCTCTTGC CAGTACAATC 003040
003041 CCCAGGCGTT TTCTGTGTTC AGAAGTAGTA AGAATGCCTT TAATTCAGAG GATTATCTAA GCTCTTTAAA GCTGTTTTTC 003120
003121 TCCATTGTCA TAGTGCCTTC TCTGAAAAAT GAATGTACAG GTATCCTATT TTCTAATGTA ATTAGGATTT TTTAAAAGCA 003200
003201 ATTTTTGATA GTTTTTCTTT TAAAAAGTAA AATTCAGCAC TGTGACTTGA ACCCCCAAAT CTTTCACATA CAGGTGAAAC 003280
003281 ATTAAGCCAC AAATAAAAAT AATGAACAAG AAAGAAGACA AGATCCTAAT TCCTGTCATT AGTGACCTAA GTACCCCATA 003360
003361 TCAGAAACTT TGCAAAACAG ATCTAGGGAC AGAAGGGCTT TGAAAGACAT TTTTCTTTGG GGCAAATTTC GTGTGCCAGA 003440
003441 ACTACAGTTT AAATGTTTTT ATGAGCAAGG GAAGGTAGCA TTGATTCCCA TAGCTTTCTA ATTAGATACA TGCTGTCATG 003520
003521 GATGTAAGCC TTAAAGGAGT TAATACTAAT CTTGTACATA CACAAATTTT CCTCAGGTTT TTTTATTTTA AAAAATGATT 003600
003601 TGTTAAAAGT ACTGTCTGCT AGACCCTTGC CTTTGAGTGG CTTTGAAACT TAATATAGTT TTTAAAAAGT GCAATGGGAT 003680
003681 GAGATTATGC TATTAGTATA TTAAAAGCAT GTTTCTGTTT TACTCCAATT TGTAAGATCA TTTAATGGAA TAAAGATCAC 003760
003761 AACACCATGT
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Predicted Small Protein

Name NONHSAT021887_smProtein_1445:1582
Length 46
Molecular weight 5023.753
Aromaticity 0.111111111111
Instability index 83.1957777778
Isoelectric point 8.68377685547
Runs 6
Runs residual 0.0289141414141
Runs probability 0.0184449155037
Amino acid sequence MPCFILFYFLRQRSRSVAQVGVQWCNLAHCNLHLPGSSDSPVSAS
Secondary structure LLEEEEEEHHHHLLHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLL
PRMN -
PiMo -