ENST00000508799.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000508799.1

Source

Gencode19

Same with

lnc-TRIML2-7:1,NONHSAT099767

Classification

intergenic

Length

646 nt

Genomic location

chr4-:189911869..189923229

Exon number

2

Exons

189911869..189912208,189922924..189923229

Genome context

Sequence
000001 CGCCATCTTT GCTGTTTGGA AAACGGCCAT TCCAGCCTGC GAGCTTTGGA GAGACCAAGC CCCCTGAGGC AGAGGCCGCG 000080
000081 CCTCAGCATG TTACAGCTGT TTTGTTGAGG TGTGGTGAGG TTGCTTCTTT AAATGCGACC CTGATACATT CCTCCTCCCT 000160
000161 GGGCAGGTCC TTCCCTCTGG AGCCTCCAGC CACCCCTGCC TGTGTTCTGT TGCGGAAAGA CTTCTAATTT CTCCTTGGGG 000240
000241 CAGAGTGCCT GCGGAGTGGG GCGGGCCGCC GCCTTGGCTG TTTGTGAAGC GGCATCGTTG TCTGGGGTAT GATTTAATAC 000320
000321 ACTTTACCGA CCTGAATTCA TTGGATATAT GTAAAAATGA AGGAATGCAC GTTATTCTGC TTGATGCTCT GCAGAGAGGA 000400
000401 GCTGCCTGAG AGGTTGCACC TGCAGTCCTG GATGCACTGG CCCCAGGGGT GGTTGGTGCT GACTCCACAT TTGTCTAATA 000480
000481 AGATGTCCAG ATACAAAAAT GTCTGTGATG TGGGAACCGT TACAGATCTA GGAGAGTTTT TTCAACAGCA AAAAAAGCAA 000560
000561 AGCCTGTTTC TGTCAAAGTC TTTTATTTTA TTTTTGAATT TGACCTTTTA AAATAAGATT AAAACATTCC ATCAAGACTC 000640
000641 CCTTTA
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Predicted Small Protein

Name ENST00000508799.1_smProtein_356:610
Length 85
Molecular weight 10040.7554
Aromaticity 0.130952380952
Instability index 81.2488095238
Isoelectric point 8.43695068359
Runs 15
Runs residual 0.0445859872611
Runs probability 0.0248778189955
Amino acid sequence MKECTLFCLMLCREELPERLHLQSWMHWPQGWLVLTPHLSNKMSRYKNVCDVGTVTDLGE
FFQQQKKQSLFLSKSFILFLNLTF
Secondary structure LLLHHHHHHHHHHHHLHHHHHHHHHHHLLLLEEEELLLLLLLLLLLLLEELLLEELLHHH
HHHHHHHHHHHLLHHHHHHHHLLL
PRMN -
PiMo -