ENST00000546382.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000546382.1

Source

Gencode19

Same with

lnc-POTEM-2:5,NONHSAT035501

Classification

intergenic

Length

649 nt

Genomic location

chr14-:19872436..19925332

Exon number

6

Exons

19872436..19872514,19894700..19894790,19919138..19919273,19919492..19919629,19921359..19921470,19925240..19925332

Genome context

Sequence
000001 GGCCCCTGCA GCAGCAGCGG CGTGGTCAGA GCGAGCTTCG GAGAAGCAGT GGTGGGTTCC ATGTGATGGT GGAGTAGGAG 000080
000081 GCAGGTCTCC GCGGTTTCTT CATGTGGCTG CAGATGGCAG GATTTCCCAA AGGTTTCTGG CTGAAACATA TTCCGTGGTG 000160
000161 TATCTGTACA GCAGTTTCCT CATCCCTGCA GCTGTGTTTG AACAGGTCAT TTACCATGCT GTCCTCCAGG TTCAACAGTA 000240
000241 TGGCTCCAAA GGATGAAATT TCATTCTGAT TTTCTGGCTG AAGACTATTC TCTTTGTGTA TGTCCACCAC AGTTACTTTA 000320
000321 TCCCTTCATC TGTGGATGGG CAGTCTCGCT GTATTGCCCA GGCTGGAGTG CAGTGGCATG ATCTCAGCTC ACTGCAAGCT 000400
000401 CTGCTTCCTG GGTTCACGCC ATTCTCCTGC CTCAGCCTCC TGAGTAGCTG GGATTACAGG CACCCGCCAC CACGCCCAGG 000480
000481 AAAGAAAAAA GAAGAAAACA AACCTCCATA CGAGAATGGG TCTAAAGGAA CTTCCCAAAC CTCCATGATT TTGCAGGAAA 000560
000561 CAAGATAAAG TGACACTGAA TACTGCAGAG CCAAAGATGA AAGGGGAAGC AATTCCAGGC CGATGAGAAG ATGCACGATT 000640
000641 GCCATTCAG
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Predicted Small Protein

Name ENST00000546382.1_smProtein_101:268
Length 56
Molecular weight 6344.4768
Aromaticity 0.145454545455
Instability index 76.4327272727
Isoelectric point 9.09954833984
Runs 11
Runs residual 0.0484848484848
Runs probability 0.0347432994492
Amino acid sequence MWLQMAGFPKGFWLKHIPWCICTAVSSSLQLCLNRSFTMLSSRFNSMAPKDEISF
Secondary structure LLLLLLLLLLLHHHLLLLLLEEHHHLHHHHHHHHLLLEEEHHHHLLLLLLLLLLL
PRMN LLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLL
PiMo oooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiii