ENST00000552826.1
Revision as of 15:01, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000552826.1 |
Source |
Gencode19 |
Same with |
lnc-FOXG1-6:11,NONHSAT036107 |
Classification |
intergenic |
Length |
449 nt |
Genomic location |
chr14+:27106447..27275587 |
Exon number |
4 |
Exons |
27106447..27106539,27200270..27200362,27267120..27267236,27275442..27275587 |
Genome context |
|
Sequence |
000001 CCAAGAACTT GCCATGTGAT CCATCACTAC TAGACTCCCA CAACTGCATT AGATTTGTTC AGGATTTTCA TATAATTTTC 000080
000081 ATAACTGGCT AAGCATTGGA AATGGATGGG GAGAAGGCCT GATGAAAATT ACTGAGGAAG CCTCTTAGCC TATGTGCTCT 000160 000161 GAGAGTAGTG ACACCTAGCA GTCGTTAGAT GAGGGTCTCA TCCTTTTGCC CAGGCTGGAG TACAGTGGTG TGTATGTAGC 000240 000241 ACACTGCAGC CTTCAACTCC TGATCCTCCA ACCTCAGCCT CCACAGTTGC TGGGATTACA AGTTCAAGTT GGTGTGTATC 000320 000321 TGCAAAGGCG ATGGAAAGGA GTTCTTACAT ATGCATATTC TGAAGAAGGA TGTTACCCTT ACTGAAAAAC TTATTCCAAG 000400 000401 ATATGTTTAA TCAATCATGA GAAAAATAAA GAGACATCCT TATGAATGG |
Predicted Small Protein
Name | ENST00000552826.1_smProtein_350:409 |
Length | 20 |
Molecular weight | 2297.8008 |
Aromaticity | 0.0526315789474 |
Instability index | 60.1631578947 |
Isoelectric point | 9.52288818359 |
Runs | 5 |
Runs residual | 0.0123839009288 |
Runs probability | 0.04984984985 |
Amino acid sequence | MHILKKDVTLTEKLIPRYV |
Secondary structure | LLEEELLLLHHHHHLLLLL |
PRMN | - |
PiMo | - |