ENST00000553181.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000553181.1

Source

Gencode19

Same with

lnc-HPCAL1-1:1,NONHSAT069103

Classification

intergenic

Length

1737 nt

Genomic location

chr2+:10588820..10591453

Exon number

4

Exons

10588820..10589307,10589870..10589997,10590179..10590407,10590562..10591453

Genome context

Sequence
000001 CGGCCCGCGG CAGCTGAACG GCAGAGCCTG TAGCTGCACA GCTGTGCTTC CACCTGGCGT TCAGTACCTC GTGCCCGAGA 000080
000081 GCGGAAAAGG GAAATCGCGA GCGGAGGACC GATGTGCTGG CCACGTGGGC CCCGCCGGGC CGACTCCGGA CCCTGCTGCC 000160
000161 GCCCATTCCT CCGGTGCAAG GGACCTGGAA GTGATCCCGG TGCCGCTCTG CTCCCACCAG CTAGGGAGCA GAGGCGCGGG 000240
000241 AGGGAAGGGG CGTCCCGGGG GTCGCCAGCA CGCTGCGGGC AGGGCTGGCA GCCGCCTCCA CGCCCCCGCG CTGGAAGCCT 000320
000321 CGTCTTTGTA ACATCGAGGT ATCCTGTAAC TAGATGGGTC CTGGCCTGCG GAGGTAGTTT CCCCTGTGAA GCCAGGGACT 000400
000401 CAGCCAGGAG CGTGAGGGGA CCCGGATCCT GAGTCTCCAA GCCGCCCACT ACCCTCTGCT TTACCGGATG GAACTCATCA 000480
000481 GTAACTAGGT CTGAGGCACA GTCAGTGAAT ACCTGTTTAA TGAATGCATG CATAAATGAA TGAATGGATG ATCCAGCTCT 000560
000561 TCCTGGAGCA GGCACGACTT CCACAGAAAC AGAGCAAACG CTAGCCGTAA GCAGAAAGAA CGTTATAGCT CCAGCGCTGA 000640
000641 ATGAGACATC TTTGATTCTG TGGTGATGCG GACTTTGTGC CTCTCTGTGA GGAATCACTT TGTTCCAATG ACGCAATTTT 000720
000721 CCTCACACTC CGGAAGTGTC CTGCACTGCC AGAATCGCCC AGCTTCCCGG CACACCTATC AACCAGTCGT TCCCAGCACT 000800
000801 GCCCAGTATG CAGCCTCCAG GCAGAGGGCC TGGATGTCTT GGCAGCCCAC CCCAAAGCCC AAACTCCTGC CCGCATGCTG 000880
000881 GGAAGGTGAG CCCTTGCCTG GAGAGCCCAG CAGGGGAAAT AGAAGGAGGG AAGGAGGCCT GCTCCTTCCC CGGAGCTCTG 000960
000961 CTCTGCGGCT GCAGGAAGAC CCGCAGAGGC CCTGGGCAGC AGAACTGTGG ACAGCAAGGC TGGAGTTGTG AAACCCAACC 001040
001041 ACTCAGCTGG ATTCCAGAAG CTCAGGTGGT GGTGACTAAA CCTGGCCTTA CTTAAAATGC ATGACTTTAT TGTCTTTCAA 001120
001121 TGTATTTTCA GTAAACTTCA TCCTCTCCAT TACTATTTTC TTTTCTTCGG AAACAAGCAA CAGATCTTTG TAAAAAAAAT 001200
001201 ACGTGATGCC ACGCACTTAG GAATCACCCT CATGTGGAGA TGAGATTTCT TTTTTATTTT TTTTTTCTGA GAGTCTCACT 001280
001281 CTGTTGCCCA GGCTGGAGTG CAGTGACGTG ATCTCGTCTC ACTGCAACCT CTGCCTCCCA GGCTCAAGCG ATTCTCATGC 001360
001361 CTCGGCCTCC TGAGTAGCTG GGATTACGGG CATGTACCAC CGTGCCCAGC TAATTTTTGC ATTTTTAGTA GAGATGGGGT 001440
001441 TTCGCCATGT TGGCTAGGCT GATCTCAAAC TCCTGACCTC AAGTGATCCA CCCACCTCGG CCTCCCAAAG TGCTGGGATG 001520
001521 ACAGGCGTGA GCCACTGTGC CTGGCCAGAG ATGAGACTTC TATGTGTGGT GCTAAAAGAG TGAATAAAAA CATTAGATAC 001600
001601 TACACTGGAC ATGCTTCTAA GAGCTTAGTC ATCTCACCTA AGTTCTGGGA CCAACTCCCA TTTTCTTAGG ATTCCTTGGG 001680
001681 CCCCCTTACC ACCCCCCCGC CGCTCTGCCC CGCTCATTAT GAAAGTTTGG ACATCAC
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