NONHSAT102795
Revision as of 10:05, 16 October 2014 by 192.168.72.52 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT102795 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1184 nt |
Genomic location |
chr5-:92746502..92916953 |
Exon number |
6 |
Exons |
92746502..92747215,92774409..92774447,92889467..92889569,92890580..92890701,92899070..92899169,92916848..92916953 |
Genome context |
|
Sequence |
000001 CCCTCGACTC GCGAGGGCGT AAAAGTTTGT CTCAGCTCGA GCATTCCTAG CGCCAACACG CCCTCAGGTA AAGGTGGAAG 000080
000081 TAAATGGCCA CGCTGTATTG ACAGAGCAGG TAGATGAAAC TCAAGAGAAA AGGTGTGGAT AAATGAAACT AGCCCATGAT 000160 000161 GAACCTGTTT TCTCCGTGAC CACAATATTA ACCAGGATGA ATGGCGGTGG CAGTGGGCCT GCATCACAGG TTGCAGCAGA 000240 000241 TGTTCTCAAT ATTTCTATTA AAATTTCCTT ATTTCCATAT GCAAGAGGAG CCCCAGAGCT GCATCCTTAT GGTAGCTACC 000320 000321 ATGCCGTGAT GTAAGCTGCC ATTCACTGGG GAGCTTTGGC AATAGAATTG GCTAGATCAG GAAGCCTATG TCAACTATGG 000400 000401 AACAACAACT TGCAGCTCAT CTCTATTGAT GGTGAAACAG TCGCAAATGG AATTCCAAGA AACATTCTAT ATACACTGCC 000480 000481 TCTAGGACTG GGACAGATAG CCACTGAGTA CCTGCTTCAA ATCACCCTGC ACGTTTTCTC TTTGGAAAGA TAAGCACTGG 000560 000561 AGAACCATCT CGTTACCTTC AGCAGAAATG GAAACAAATC AAGACATTAA GAATGCCGCA GTGGACAGCA GTTATGCAAG 000640 000641 GTTCAGCAGA GGAAGTTTTC AAGATGGTGT GCCTCACTAG CCAGAAATCA GAAAAGATCG AAGCTAGCCT TTTCATCTCA 000720 000721 GCTGCTCCTT AAATCAGTGC AACCCCTCCA AATTAATGTG AATTGAAACT TGCATTGCTT TTCAACTTAA TTGAATACTT 000800 000801 ACTATATGTG AACCACTGCA CAAAATAGGG GAAGAAGATG TGGGAGACAA AGATGTGGAG CCTGTCTTCA ATAAATTTAC 000880 000881 AGTTAGTTTC AGGGTACATT GTTTTTCTTC TGCTGTTAAT TAGGTGTATC CCCAAGACAA TAAATACATG AATGGAAAAG 000960 000961 TATATTCTGT GTTTTAAGTC TCTTTAATAA AAAACAAAAC AAAATCCAAA AAAACTCCTA ACATGGCAAC TCAGGACATT 001040 001041 TTAATCCTTT TTTTTGTTGT TGGGCTTCTG ATAGGATCCA TTTTATTGAT TCCATAAATA TTTAGTAGAC TTTAGACATA 001120 001121 TTAATACATT GTAGTTTGAG TTAATTTGCA TTAAATTCTG TTTTTTTCCC CTTAGGTATA GATT |
Predicted Small Protein
Name | NONHSAT102795_smProtein_200:328 |
Length | 43 |
Molecular weight | 4921.9126 |
Aromaticity | 0.119047619048 |
Instability index | 78.5857142857 |
Isoelectric point | 6.80682373047 |
Runs | 7 |
Runs residual | 0.00949367088608 |
Runs probability | 0.0212986095339 |
Amino acid sequence | MAVAVGLHHRLQQMFSIFLLKFPYFHMQEEPQSCILMVATMP |
Secondary structure | LHHHLHHHHHHHHHHHHHHHLLLLLLLLLLLLEEEEEEEELL |
PRMN | - |
PiMo | - |