NONHSAT054842

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT054842

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

633 nt

Genomic location

chr17-:54902108..54916134

Exon number

3

Exons

54902108..54902214,54902442..54902682,54915850..54916134

Genome context

Sequence
000001 cattactcta gaaagttcct tcatATGaaa atatggaatg cctcatgaat ttatatgccg ttcttgtgca gTAGTATTTA 000080
000081 TAGAAAAAAA AAAGGTTTAA CAAGGCTTGT TTTCTCTAAA AAATTACCTG GTCACAATAG CTCTCTTTTT TAGTGTGCTG 000160
000161 AAGGAGGCAG CTGAATTATA CATAAAGTTG AGATGGTCAT TTATAAGATT CACTAGAAca gggttctgca aactgcaaat 000240
000241 atgtctgcca tctgattttg tgaatgaagt tttactggaa cacagatgaa gaaaacctgc ttgatatcac acagtcagga 000320
000321 gtcaactgag ttggggcttt gaacttaggt ttatctgatg ccaaagtttg tgatgctctt CAACCATTTA GGGTACCGca 000400
000401 gagtgtggat tttgaatcac ctgcatcagc atcattttaa aatatagatt ctgtggtcct gaccaggtct ctgaagtcag 000480
000481 aatatgaagt ggagctagga atctaacttc ttaacaagtt ccctagatgc ctaagggtat ccctgaatga tacagttttg 000560
000561 tttGAAAGAC TGAAAAGCCC AAAGCTGGCC CTTTTGGGAA ATAGCAGTAA ATCATTGATA TGTGAAGGTT CCC
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Predicted Small Protein

Name NONHSAT054842_smProtein_263:328
Length 22
Molecular weight 2517.7205
Aromaticity 0.142857142857
Instability index 54.8004761905
Isoelectric point 3.91632080078
Runs 5
Runs residual 0.00816326530612
Runs probability 0.0406111994346
Amino acid sequence MKFYWNTDEENLLDITQSGVN
Secondary structure LEEEELLLHHHHHHHHHLLLL
PRMN -
PiMo -