NONHSAT098989

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT098989

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2021 nt

Genomic location

chr4+:159119871..159121985

Exon number

2

Exons

159119871..159120100,159120195..159121985

Genome context

Sequence
000001 GAAGAATCTC ATCAATGATA CTCTCACCAG CACCTTCAAT TACCTTTCTC CTCTGTATTT TCACCAAAGG TATTATGCCA 000080
000081 ACTCTCACCC TGTGAATCCA CTGACTGGGG AACATTGTTT AAGAAAATCA CATGGCTGTG CCAACAAGCA AGGTAGGAAC 000160
000161 GGCCATGTGG TGACCTGTGG GCTGAAGTTA AGTGTTGTGG TTTGATCATT GTGTAAGGTA GAATCAGAGC TGGGTTTTGG 000240
000241 TTTTGTTTGC TTTAAGTTTT GGGAATTCCT TACAGGAGAC ACGGCACAGA AGACAGAGGC AGAAGCAGCT TTATTGAAAA 000320
000321 ACAGAGCATG AGTAGAACGA CTTCAAATCC CATATGGCAC CACAGTGAGA AGTAACTTCC TCTGAGCTTC TTAGAGAATC 000400
000401 CAACAATGTC CTGCTTCCTT GGGGAGCTGC AGCCATGGGC ACATGGGAAT AGGGCTTCCA CCAAGAGTCC CGTCAGTCAC 000480
000481 AGCAACAGGA GGTCTTCCTC AGACAACTTT GATGATAGTG GTTGTTAGCC AGAGCAAGCT AGAACCAGAA AGAAAAACTA 000560
000561 TGAAGATGCC ACAGTGGGAG TCTGAGCACC TTGAGGCCTC CTGTTGGAAA CTGGCAAACC TAACTGTGGG ACACTTGGAT 000640
000641 GCTGAGTTCT GGTAAACATG CTGTCGGAGG CACGGTAATT TAGTCATTAA CATTTAAAAA CGATCTAATT CTATATACAT 000720
000721 ACTCTGTTGA AGACTTCTTC CAACCACCTT GTATTATAAA TTTAAAATAT GAAATACAAA CTCTTTATGT GTCTTGACTC 000800
000801 AGATTACCTA GGAAGGGACA GTGACCTATT CATCAATGTT TAGAATTAGA GTAAGTTATA GAATATAGTC TGAGAAAATT 000880
000881 ACTTGGACCA agaaagcaat gtccctgaca ttcatcaatc tagaaccaga gctgcagatt aagctaggtg caaatttatc 000960
000961 agaaaacaat atttttccca aatacatatt gcagccataa aatgccctaa aaacccagtt cttagaggga ctattgctta 001040
001041 cttactgaga aattgtattc tctgaaatca tagactatga gatgcattgc tgtttaaaat tattgcaata agaatgaaac 001120
001121 atctcactct tatctggagg agttaagtca ttgtgatcag tgaagccttg atttaagctc ctgtgcaaag cttcagagaa 001200
001201 tgggtctcag gacacaacat ttgacatcta ttttgacttc atttccaaga aaataggact gctatggttt gaatgtttgt 001280
001281 ctccctcaaa ccaaggtgtc ggaggtgggg cctaatggga gacgtttggg ttatcaggga gggtccctca tgaatagatt 001360
001361 aatgctctcc ctgggggtag ggaacagtta gtgagttctt gctttattca ttctcaagag agctggttgt taaatagagc 001440
001441 ctggcgcctc cctcctccct ccttgctttc tctctcaccg tatgatctta gcacattaca cctcccctca ccttctgcca 001520
001521 tgagtggaag cagcctgagc ctctcaccag gagcagatgc tggtgccatg cttcttgtac agcccacaga gcagtgagcc 001600
001601 aaataaacct cttttcctta gagattgcgc agcctcagat gttcctctag agcaacacaa aatggactaa gacaagaacc 001680
001681 ataggtccat ttcacagtac agagctgagg ttgacccctt ttatacacaa ccatactttc ttagagccca tagaatatca 001760
001761 tttcatttac atcacaccta aattccactc tttagcaaaa tcttatgtta accctatatt ttcctttgtt tgatgagata 001840
001841 ccccacaatt gctctgttgt gcagtcccca cactgcaatg agtcagtaaa ctcaattggt ttgtttacag gttgtccctg 001920
001921 gtggttttag gctgattggg ctaagacaAA CCACATCTTA TTTTTTAAAT GTCTCCTTTA AGCAAATGTT ATTATCTGTA 002000
002001 TTTTACTCTA TTCCATAAGC A
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Predicted Small Protein

Name NONHSAT098989_smProtein_1556:1669
Length 38
Molecular weight 4207.8257
Aromaticity 0.0810810810811
Instability index 92.6594594595
Isoelectric point 4.95281982422
Runs 7
Runs residual 0.009422266303
Runs probability 0.0394049511698
Amino acid sequence MLVPCFLYSPQSSEPNKPLFLRDCAASDVPLEQHKMD
Secondary structure LLLEEELLLLLLLLLLLLLLHHHHHLLLLLHHHHLLL
PRMN -
PiMo -