NONHSAT013272

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT013272

Source

NONCODE4.0

Same with

,

Classification

intronic(S)

Length

2016 nt

Genomic location

chr10-:49676050..49687239

Exon number

2

Exons

49676050..49677859,49687086..49687239

Genome context

Sequence
000001 CGGGGAGCCA GGGGCATGCT GGGGAAGAGC ATTCCAGCAG AGACATGGAC ACGTGCGAAG GCCCCGAGGT AGGGACGAGC 000080
000081 TTTGGGAACA CGAGGCATGT CAGGAAGGCC GGGGCCCCGA GGGAGTGAAG ACCAGGCGAG TGGGAGGGCC TGAGCTTGTT 000160
000161 CCAAGTGGCC CTGGAGGACT TCAGCCCACA CACCCTGAGA GAAGAGGAAG GGAGCTCACA CTGGCTATGG GCTGCCCTTG 000240
000241 CCAGGAGTTT GGTACAATCT GGAGGCAGCA GAGACTCAGA GGTTCAGCAA CTTACCTAAC AACACACAGT GGGGCTGGGG 000320
000321 GCAGCGCAGC CCACCTCCAG CGTAAGCTCA TCGCTGGATG CTGTTGCCAG GTAGGCCTCA GCGCATTCTA CCCACTAGAT 000400
000401 CTGAGTTGTC TTGGTCGGGG AGGGGGGCAT AATTAAGACT GAAGGAAGAG GCAGTCCCTA AGGTCCTGGA TCCCAGCCCT 000480
000481 AGCCAGGGAG CTGTTGTACA CACAGCTCAG AGACAAAGAC CATCCAGAGT GAAGAGGCCA ACTGTTAACT GGGTTGCTTG 000560
000561 TGTGATTGGA CAGACTCAGG TTGTCAGCTC CCCAGCCCTG CCCTGAGAAG GCAGTCTCAT GACTGTCTCT GCACTCCCAT 000640
000641 CCCCAACAGG CCCCACAGCT AAAAACCACC CCTGAGGTGG GGTGGGCATT GGCAGGGCCA GGGCTTCACC TGGAGCTCAA 000720
000721 TGTGGCAGTG CCTGCCGGAG CCTTCTAATG GGTGGTGCCT GCAGGCCTCT AGCCATGTGG GGCTCCTGGG TAGGGGTGGA 000800
000801 GGGCACTCTG CAGAGACTGG CCAGTCTGAC TCTGAAGACA CAGGCAGGGA AACCATGGCT CAGAGCAGAG AAAACATGTG 000880
000881 GGCAGCAGAC CCTGCCTGCC CACCTGAGAG AAGCCTGCCG GCCCCTGGTT GGTGAGAGCT TCTGCTGAGC CCTTGGCCCC 000960
000961 TGCTCTTTAA CATGGACAGG GCTGCTCAGA GCTGGCAGGT CCCTGGGCCG TGGGAATGCC AGGCTCTGTT GGTAGGTGGA 001040
001041 GGGCAGACAT TCCTTGGCTT GTGACACCCT GCACCAACCT GCCCTGGCAC CCTCATGTTC ACCTGAGCTC TGGGGAGGGA 001120
001121 GAAAACAGCT CCGCGGCCCC ACTCCCAGTT TTGAGGACCT TAGCCCCCAT ACTTAGTGTC AGGGCCAGGA CTAGGGATCC 001200
001201 TCACTGGCCT GGGGCACAAA ATGTAAGGGG GCACCAAAAA AACTCAGTAA TCAAGATATT TTATTGTAAT CTTTTAAAAA 001280
001281 ATGAACATGA ATGCTAAAAT ATCCTTATAT TAGGTCCACA TTGCAGCTCT AACAAACTGC CAGAAATTTG GCAGCTTAAA 001360
001361 ACAACACAAC GTGATTATCT TCTAGTTCTG GAGGTCAGAA GTCATAACCA GTCTTCTAAG GCTAAAATCC AGATGTCAGC 001440
001441 AGGACTGGTT TCTTGTAGGA CATGGGGAGA AGCAGTTCCT TGTATCTTTA ACCTTCCAGG GGCTACAGCA AGGCCTTGGC 001520
001521 TGCGGCTTCA GCACTGCAGT CTCTGCCTCT GTCCTGCCCC CACCGCCTCC ACTGTGGTCA AACTTCCTTC TGCCTTCCTG 001600
001601 GTAAAAGAAC CCCTATGATT GCACCTGGCC CCTTAGATAA CCCAGGTTAA CCTCTCCAGC CCTCATCACA CCTACAAAGT 001680
001681 CTCTTGTACT GTGTAAGATA ACACAGCCAC AGGTTCCAGG GATCAGGACA TCTTGTGGGG AAGGGCATTA TTCAGCCAAC 001760
001761 CACATCCATG GTCAAATGCA AACATGTGAA ATAAAGGCAG GAATGTGGTG GGATTGGGGT GGGAGGCACT CACCCTCAAG 001840
001841 GCCTGTGCAA GTGCATAGCT GCTCCTTTCT GTATTGAAAA CTTTGATCTT TTGTTCATCA AAGATTTTTT GCCTAATATT 001920
001921 TATTCTTAAA AGTATTACAA TAAAGTGTTT ATCCTAGTTA CTGAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA 002000
002001 AAAAAAAAAA AAAAAA
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Predicted Small Protein

Name NONHSAT013272_smProtein_719:934
Length 72
Molecular weight 7581.2237
Aromaticity 0.056338028169
Instability index 82.8028169014
Isoelectric point 4.62969970703
Runs 11
Runs residual 0.00637509266123
Runs probability 0.0248992307816
Amino acid sequence MWQCLPEPSNGWCLQASSHVGLLGRGGGHSAETGQSDSEDTGRETMAQSRENMWAADPAC
PPERSLPAPGW
Secondary structure LLEELLLLLLLEEEEEELEELEELLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHLLLLL
LLLLLLLLLLL
PRMN -
PiMo -