NONHSAT031431

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT031431

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1612 nt

Genomic location

chr12+:121837932..121856543

Exon number

4

Exons

121837932..121838021,121840545..121840610,121853962..121854180,121855307..121856543

Genome context

Sequence
000001 AGAGGGAAGG AGGTCGGCAG TGTGAGGAGC TGCTATGGTG CTGAGTTTCC TGGTAGAGCC GGCCGAGCTG AGGCGGTCGC 000080
000081 GGCCATGAAG GTGGGGGAGT GGTACTAAGG ATCAAGTATA CTGTTAAAAG AAAACAAAAA CCCAAGCATG AGGAAGGCGG 000160
000161 GTGCCACGTC TATGTGGGCT TCGTGCTGTG GGCTGCTGAA TGAAGTCATG GGAACTGGAG CTGTCAGGGG CCAGCAGTCA 000240
000241 GCATTTGCAG GAGCCACCGG TCCATTCAGA TTTACACCAA ACCCTGAGTT TTCCACCTAC CCACCAGCAG CTACGGAAGG 000320
000321 GCCCAACATA GTTTGTAAAG CCTGTGGGCT TTCATTTTCA GTCTTTAGAA AGAAGCATGT TTGCTGTGAC TGCAAGAAGG 000400
000401 ATTTTTGCTC CGTTTGTTCA GTCTTACAAG AAAATCTCCG TAGATGTTCT ACTTGTCACT TATTACAAGA GACAGCATTT 000480
000481 CAGCGCCCTC AGTTAATGCG ACTGAAGGTG AAGGACCTGC GGCAGTATCT CATTCTGAGA AATATACCCA TAGATACTTG 000560
000561 TCGTGAGAAA GAAGACTTGG TGGATCTAGT ACTGTGCCAT CATGGACTAG GCTCTGAGGA CGACATGGAC ACAAGCAGTC 000640
000641 TGAATTCTTC AAGGTCCCAG ACTTCTAGCT TTTTTACACG TTCGTTTTTT TCAAACTATA CAGCCCCCTC TGCTACTATG 000720
000721 TCTTCGTTTC AGGGAGAGCT TATGGATGGA GACCAAACAT CCAGATCTGG AGTGCCGGCA CAGGTACGAG GGGGTAACTA 000800
000801 ATTACACCCA GGGCCCGGCA CGCTTATTCT TGGCCGTATA TGGTGGGGCC TTTAGTGCTT GATGACTTCT GATAAACTTC 000880
000881 AAGTCATGTG CTGGAGTGAA GCTTCCACAC CCAGCTGAAC TCTGCACTTA AAGGCTGTCC TGATGTATAG TGTCTGCTGA 000960
000961 GGTGCTAGGT GGCTCCAAAG TCTGCTGTCT GAAGGGTCCC AAAATAGCTC ATCAGTCTCT TGGCCTTAGT TAATTTCTCT 001040
001041 GTCTTACACA GTTAGACACT AACTGTTGAA GAAATGGCTG TGAAAAAGTA GCACATACAC ATTTGTAGTG TTATGTGTTA 001120
001121 GTGCACGTGT TTCAGTGACC ACAGAAAACA ATCAGTAGTG TAAGTTAGCC TAATGCCCAT TTGTCTTGCT ACAGTGAAAT 001200
001201 TGTTCTAATT TAGTTAATGA AAGAGCCATC TGAATTAGTG AAAAAATGTA GTTATTTACT AATTGTAATT AATAATATTG 001280
001281 TCCCAGTGAG GTCCTTGGAC ATCCTGATTG AATAACATGT AAAGGCTTGT AATTAATATT TACTTGTACG TGAGTGATTC 001360
001361 TAAACTGCTG AAAGAAATGT TTTGAACAAA TTTTTTCACG CTTAATTTTC TTCTCTGAAG AAGGGGGTTA TTAAAAGTAG 001440
001441 AGGAAAgctg gatgcggtgg tgtgagcctg cagtctgata cttggcaggc tgaggcaaga ggattgcttt agttcaggag 001520
001521 tacgaggctg caggtgtacc atgattgcaa ctgtgaatag ccactgtacc cccagcctgg gcaacatagc aagacttttt 001600
001601 tttttgtttg ga
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Predicted Small Protein

Name NONHSAT031431_smProtein_443:565
Length 41
Molecular weight 4386.8064
Aromaticity 0.1
Instability index 40.89775
Isoelectric point 5.98883056641
Runs 8
Runs residual 0.0219758064516
Runs probability 0.024531884826
Amino acid sequence MFYLSLITRDSISAPSVNATEGEGPAAVSHSEKYTHRYLS
Secondary structure LEEEEEEELLLLLLLLLLLLLLLLLLEELLLLHHHEEELL
PRMN -
PiMo -